Gene Rmet_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1193 
Symbol 
ID4037995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1307866 
End bp1308561 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID637976579 
Producthypothetical protein 
Protein accessionYP_583348 
Protein GI94310138 
COG category[S] Function unknown 
COG ID[COG3235] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00338949 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG ACGATTCCTC ACTTCAGGCC CTGTTGGCAA CCTGGCCGCT TCCGACCCTC 
TCCGTGGCGA TGCTCGCCTG GGTGGTGTCG CAGCGGCCAT GGCGGCTGCT GCGGCAGGAA
CCGCTCCAGC ACGCCTGGCT CGGCGGGCTC GTCTTCCTGA CCTTGCTGTG GTCGGCGCGG
GCGACGGTCG GGACCGGGGT CGTGGTCCAA CTGATGGGGG CCCCGCTGGC GGTGACGATG
TTCGGGCTGC CGCTGGCGAT GCTGACGCTG GCCATTGTCG ATCTGGTGTC GCTGCTGGGG
CTGGCTTACC TGGCGGGGCA GGGCTGGGCG GATATCGCCT GGGTGTCCCT GGCGCCGCGC
TTCATCTGGA TGGCGGCGGC TCCGGGGTTG CTGACTGCCG GGCTACAGGC CGTGATGCGA
CGCCGACTAC CGCGCCACCC GTTCATCTTC ATTCTCGGTC ACGGCTATTT CGCCCCGCTG
GTGGCCGCCA TCGTCGCCGG CGGCCTTCGC ACGCTCTGGC AGTTCCATTT GGGACCGCCC
CATGCCGGGC TGACGATCGG GGACAGCCTG ACCGGCGCCG TGGTGATCGG GTTCGGTGAG
GCATTCCTGA CGGGGATGCT GGTGGCGATC TTCGTCGTCT ATCGCCCGCA ATGGGTGCTG
ACGTTCACAG ACGAGGACTA TCTGACGGGG AAGTAA
 
Protein sequence
MQIDDSSLQA LLATWPLPTL SVAMLAWVVS QRPWRLLRQE PLQHAWLGGL VFLTLLWSAR 
ATVGTGVVVQ LMGAPLAVTM FGLPLAMLTL AIVDLVSLLG LAYLAGQGWA DIAWVSLAPR
FIWMAAAPGL LTAGLQAVMR RRLPRHPFIF ILGHGYFAPL VAAIVAGGLR TLWQFHLGPP
HAGLTIGDSL TGAVVIGFGE AFLTGMLVAI FVVYRPQWVL TFTDEDYLTG K