| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1106 |
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| Symbol | |
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| ID | 4037904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1204074 |
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| End bp | 1205702 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976488 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_583261 |
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| Protein GI | 94310051 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.772791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.374743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC TGAAGAAGGG GCAGGGGTTG AGGCAGTCGA TGGCCTGGCT GCATACGTGG
TCGGGGCTGT TGGTGTGCTG GGTCCTTTTC CTGGTGTTCT GCGGCGGCAC GGCAAGCTAC
GTCAAGGACG AGATCTCGCT ATGGATGAAG CCGGAGCTGC ACGCGTCGTG GGAGGGAGAC
GTATCCGCCG CTGACGTCGC GCAGCGTGCC TACGCATACC TGCAACGCGA GGCGCCTGGC
GCCGAGCGCT GGTTCATCAA TCTGCCGGAT GCCCGGCGTC CCGCGATCTC CGTATTCTGG
CTGCGCAAGC CCGGTCCGGC CGATGCCGGC AAGGGCAATC GCGCGCGCCT CGAATCACGC
ACGCTTGATG CCCGCACTGG TATGCCAATT CCCGGCGCCC GCGATACGCG TGGTGGCGAA
TTTCTCTATC GGCTTCATTT CGATCTGCAC TACATACCTG CGGTCCAGGC ACGCTGGATC
GTGGGCATCT GCGCGATGTT CATGCTCGTG GCGATCATCA GCGGCGTGAT CACACATCGG
CGCATCTTCA CGGACTTCTT CACGTTCCGT CCGCGCAAGG GCCCGCGCTC CTGGCTCGAC
GCGCACAACG CCATGGCGGT ACTGGCGCTG CCATTCCATC TGATGATCAC CTATACGGGC
CTGGTGACTC TCCTGTTCAT GTACATGCCG TGGGGCATCC AGGCTGTCTA CAAGGGCGAC
GAGAAGGCGT TCACGGCCGA ACTCGCGGCT CGCGCGCCGC GCGTCAAGGC GGCGAACGAA
GCAGCGGTGC TGGCGCCGAT CGCGCCGATG GTGGAGCAGG CCATGGCGCG CTGGCACGGC
ACGCCGCCGC AGCGGATAGC GGTGGAGCAG CCCAGCAATG CCAATGCCAC CGTCTCCCTG
ACGCGTGCGG AGAGCCGCGA TATCGGCACC ACGCTGCCGG TCATGGTGTT CTCGGGCGCC
ACTGGTGTCG TTCAGGCCGC GCTTGGCGAG AGCGTGGCCG CGGCCAGCGC CACACGCAGC
ACGATGGTCG GCTTGCACGT GGCGCATTTC GCACCGCCGT TACTGCGCGC GCTGTTTTTT
GTCTCCGGGC TGGCCGGCGC GCTGATGGTG GCCACTGGCG CATTGCTGTG GGCGGTCAAG
ACGCGCCAGA GTCATGCAAA GCGTATCGCC GCCATCGGGC GCGTGCCGTC TGGGCTGCGG
CTCGTCGAGG CGCTCAACCT CGGTGTCATC GCTGGTTTGC CGATTGCCTT CGCTGCCTAC
TTCTGGGCGA ACCGGCTGCT TCCGGCCGAC ATGGCCCAGC GCTCCGGCAT GGAGATCCGG
GCCTTCTTCA GCGCCTGGGC GGTGGCGGCG CTGCTGGCGC AATGGAAACC CACGCGGGAG
ATGTGGCGCG TGCTGCTGTG GACCGGCGCG GGTTTGTTCG CGGGACTCCC GGTGCTCAAC
GCCATCACCA CTACCTCGCA CCTCGGGGTG ACGCTGCGCC ACGGCCCGAT TGCCGTCGCC
GGTTTCGATC TGACCGTGCT TGCCATCGGC ATTGGTATCG GTGCCGCCGC ATGGATGCTT
GGCAAGCGGG GCCCCGAAAA ACGCGCAGCT CCTGCAGTCA GGCACCGCGC GGCGGAGGTG
TCGCCATGA
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| Protein sequence | MAELKKGQGL RQSMAWLHTW SGLLVCWVLF LVFCGGTASY VKDEISLWMK PELHASWEGD
VSAADVAQRA YAYLQREAPG AERWFINLPD ARRPAISVFW LRKPGPADAG KGNRARLESR
TLDARTGMPI PGARDTRGGE FLYRLHFDLH YIPAVQARWI VGICAMFMLV AIISGVITHR
RIFTDFFTFR PRKGPRSWLD AHNAMAVLAL PFHLMITYTG LVTLLFMYMP WGIQAVYKGD
EKAFTAELAA RAPRVKAANE AAVLAPIAPM VEQAMARWHG TPPQRIAVEQ PSNANATVSL
TRAESRDIGT TLPVMVFSGA TGVVQAALGE SVAAASATRS TMVGLHVAHF APPLLRALFF
VSGLAGALMV ATGALLWAVK TRQSHAKRIA AIGRVPSGLR LVEALNLGVI AGLPIAFAAY
FWANRLLPAD MAQRSGMEIR AFFSAWAVAA LLAQWKPTRE MWRVLLWTGA GLFAGLPVLN
AITTTSHLGV TLRHGPIAVA GFDLTVLAIG IGIGAAAWML GKRGPEKRAA PAVRHRAAEV
SP
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