Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1033 |
Symbol | |
ID | 4037830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1121652 |
End bp | 1122356 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637976414 |
Product | 17 kDa surface antigen |
Protein accession | YP_583188 |
Protein GI | 94309978 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3133] Outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.244609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGTC CGGAAACCCT CCCCTCCTTG CCGACCCAAC GCCGCCTGAA TCCGCTGATT GGCGCGGCGG CTGTGTCGAT CGTCGTTGCC AGCCTCGCGG CCGTGGCAGC GATCACGGGT GTGCTGCCGA TCAGCAAGGC CAACCAAGGT GGCACCGAGC CCACCGCGGC ACAGTACAAC GCGCAACCCG CCACGCAAGC GGAGACGCAA ACACCTGCAC CCGGCTCGAC CACACGCCCG CCGGCCTATG ACAGGCAGTA CGCCCAAAAC GCAATGCCAC AGGCGCCTGC CCAGCAGCAG CAGCAGCAAC AACAACAACA ACAACAACAA CAACAACCGT CGCAGACCGA GCCGAATACC GCCGCACGGG CCAGCCATAC GGCTGGCCAT GTAACCGGCG TGCAAGCGGT GGAATCTGAA AAGCCGACCT CCGGTCTTGG CGCGGTGGGT GGTGCGGTAG TGGGCGGCCT GCTCGGCAAC CAGATCGGCA GCGGCAATGG CCGCATACTG GGGACTGTCG CGGGCGCGGC AGCCGGCGGC TTCGGCGGCA ACTATGCCGA GAAGAAGCTG AACACGAACA AGTCCTACCG CGTCAGCGTG CAGATGGACG ACGGCTCGCG CCGCACGTTC ACTTACCAGA ACCCTCCGGG TGTGGAAGTT GGACAGCGCG TGCACCTCGA GCGTGGTGTG CTGGTGACGG GCTGA
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Protein sequence | MSGPETLPSL PTQRRLNPLI GAAAVSIVVA SLAAVAAITG VLPISKANQG GTEPTAAQYN AQPATQAETQ TPAPGSTTRP PAYDRQYAQN AMPQAPAQQQ QQQQQQQQQQ QQPSQTEPNT AARASHTAGH VTGVQAVESE KPTSGLGAVG GAVVGGLLGN QIGSGNGRIL GTVAGAAAGG FGGNYAEKKL NTNKSYRVSV QMDDGSRRTF TYQNPPGVEV GQRVHLERGV LVTG
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