Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0898 |
Symbol | |
ID | 4037694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 985138 |
End bp | 987693 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637976278 |
Product | hypothetical protein |
Protein accession | YP_583053 |
Protein GI | 94309843 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGCCG AAACGACCGT CAAAGCTTCT CAGCCGCGTT TTTCCGCCTG GCGGCAAGCC TTGCGCATGG CCCGCCGGGA CTGGCTGGCC GGGGAACTGA CGCTGCTGTT GTTCGCGCTA GTGCTGGCCG TGGCGGCGCT GACCAGCGTG GGCTTTCTGG CGGACCGGAT GCGTCTGGGC CTGGAGCGCG ACGCGCGGCA GATGATCGCG GCCGATGTGC TGTTGATTTC CGACCAGCCA TTCGACGCGG CCTTCGCCGA GCGGGCGCAG CGTGACGGAC TCCGGGTGGC GCAGACCGTC ACGTTCCCGA GCATGGCAAC GGCGCGCGTG AGAGGCGCGC CCGAGCATGC CGAAGCACCG AGCCAGCTGG CGGCGCTGAA GGCGGTGACC GACGACTATC CGCTGCGCGG CCGGCTCAAG GTGGCCAGTG CCCCGGGCGG CGCCGAGACG GTGGCGGAGG GCATTCCCGC CCCGGGCAAG GTGTGGGTCG ACGAAGCGCT GCTGATCGCG CTAGGCCTGC ATGTTGGCGA CAGCCTGCAA CTCGGCAGCA AGACGTTTTA TATCGACCGG ATTCTCACGC AGGAACTCGA TCGTGGCGCG GGCTTCATGA ACTTCGCGCC GCGTGTGTTG TTGCCGCTGT CCGACCTTGA TGCGACGAAG CTGATCGGCT GGGGCAGCCG TGTGACATAC CGCTTGCTCG TTGCGGGCTC CGATGTGGCA GGCGAGGAGT ATCGGAAGTG GGCAACCGAC GAAATCCAGC GCCGGCATCT GCGCAATACG CGCGTGGAGT CTCTGGAATC GGGACAGCCG CAGATGCGTG CCACGCTTGA TCGCGCCGAG CGCTTCCTGT CGCTGGTGGC GGTGCTGTCG GCGATGATCG CGGCAGTGGC CATCGCGATG TCCGCCCGCC GCTACATGCA GCGCCACACC GATGCCTGCG CGGTCTACAA GTGCCTGGGC CTGTCACGCC AGCAGATCCT GACCGCTTTC GCGATCGAAT TCGCGCTGCT CGGCCTCGGT GGCGCGGTGG TGGGCGTGGT GCTGGGCTAT CTGGCGCACT ATGGATTGCT GATGTCGCTC GGTGGGCTGC TGCAGGTGTC GTTGCCGCAT CCGTCGGCGG TGCCCGCGCT GATCGGCGTG GCCGCGGGGC TGGTACTGCT GGTGGGCTTT GCATTGCCGC CGCTGCTGGC GCTGACGCGT GTGGCGCCAC TGCGTGTGCT GCGACGCGAT ATCGGCGTGC CTCCCGTGTC CGTCTGGGTG GCCTATGCGC TCGGGCTCGG TGCTTTCGTG GCGCTGCTGC TGGTGGCGGC GCGTGACCTG AAGCTCGGGG TGACCACGGC TGGTGGGTTT GTTGGCGCGG GTATCGCGTT TGCGGTGCTG GCGCTGGGTC TGTTGCTCCT GCTATCTCGT GTGATGCGTG GCCGCGCGCG TGGCAATGTC GGCTGGCGCT TCGCGCTGGC CGTGCTCGAA CGCCGCCGTG GCGTCACTGT GCTGCAGACC GTCGCGCTTG CCGTCGGGCT GATGGCGCTG TTGTTGCTGG GTATGACGCG CAACGACCTG ATCGATTCTT GGCGCAACGC CACGCCGGCC AATGCGCCGA ATCGCTTCAT CATCAATATC CAGCCGGATC AGCGCGATCC GCTGCAGGCG ATGCTGGCAA AGGATGGCGT GGAAGATCTG CTCTATCCGA TGGTGCGCGG CCGCCTGACG CAGATCGGCA GCCGGCCGGT CCAGGCCGAG AGCTACCCGG AGGGACGCGC GCGCAATCTG GTGGAGCGCG AGTTCAACCT GTCGTACATG GACCAGCTTC CCGAAGGCAA TCAAGTCACC TCGGGCCGCT GGGACGAAGG TGGCGCGTCG GTGGAAGAGG GCATCGCCAA GACGCTACAT ATCCAGCTTG GCGACACGTT GCGGTTCGAC GTGGCCGGAC AGACCGTCGA GGCACCCGTC ACGTCGCTGC GTAAGCTCGA CTGGGGCTCG ATGCGCGTGA ATTTCTTCGT GATTCTGCCG ACGGCCAAGA TGCAGGGTCT GCCCGAGACC TACATCACCG CGTTCCATCT GCCGCCCGCC AAGGCCGCGC TTGGCAATCA GCTTGCCGCT GCATTCCCGA ACATCACAGT GGTGAACACC GACTTGATCC TGCGGCAGAT CCAGCAGGTT CTGGACCAGG TAATCGCCGC CGTGGAGTTT CTGTTCGTCT TCACGCTGCT GGCCGGCGTG ACCGTGCTCT ATGCGGCGCT ATCCGGCGCG CGTGACGAGC GCAAGCGCGA TGCCGGGCTA CTCAAGGCGC TGGGTGCGTC GGCGGCGCTG GTACGACAGA CCCAGTACGC GGAATTCCTC GTGGTCGGCG GACTGGCGGG GCTGCTGGCC AGCGTCGGCG CTATCGGGGT GGGTTGGGGC CTGTCGCAGT ACGTGTTCGA TTTCCCGTAC CGATTCAACA TCTGGATCGT ACCGGTCGGC GTGGTTTCTG GCATGATCTG CGCTTTTGCG GGCGGCTGGC TCGGATTGCG CGAGGTATTG CGGCAACCGG CGCTGGCGAC GCTGCGCGAC GTCTGA
|
Protein sequence | MSAETTVKAS QPRFSAWRQA LRMARRDWLA GELTLLLFAL VLAVAALTSV GFLADRMRLG LERDARQMIA ADVLLISDQP FDAAFAERAQ RDGLRVAQTV TFPSMATARV RGAPEHAEAP SQLAALKAVT DDYPLRGRLK VASAPGGAET VAEGIPAPGK VWVDEALLIA LGLHVGDSLQ LGSKTFYIDR ILTQELDRGA GFMNFAPRVL LPLSDLDATK LIGWGSRVTY RLLVAGSDVA GEEYRKWATD EIQRRHLRNT RVESLESGQP QMRATLDRAE RFLSLVAVLS AMIAAVAIAM SARRYMQRHT DACAVYKCLG LSRQQILTAF AIEFALLGLG GAVVGVVLGY LAHYGLLMSL GGLLQVSLPH PSAVPALIGV AAGLVLLVGF ALPPLLALTR VAPLRVLRRD IGVPPVSVWV AYALGLGAFV ALLLVAARDL KLGVTTAGGF VGAGIAFAVL ALGLLLLLSR VMRGRARGNV GWRFALAVLE RRRGVTVLQT VALAVGLMAL LLLGMTRNDL IDSWRNATPA NAPNRFIINI QPDQRDPLQA MLAKDGVEDL LYPMVRGRLT QIGSRPVQAE SYPEGRARNL VEREFNLSYM DQLPEGNQVT SGRWDEGGAS VEEGIAKTLH IQLGDTLRFD VAGQTVEAPV TSLRKLDWGS MRVNFFVILP TAKMQGLPET YITAFHLPPA KAALGNQLAA AFPNITVVNT DLILRQIQQV LDQVIAAVEF LFVFTLLAGV TVLYAALSGA RDERKRDAGL LKALGASAAL VRQTQYAEFL VVGGLAGLLA SVGAIGVGWG LSQYVFDFPY RFNIWIVPVG VVSGMICAFA GGWLGLREVL RQPALATLRD V
|
| |