Gene Rmet_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0582 
Symbol 
ID4037371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp623215 
End bp624318 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content67% 
IMG OID637975957 
Producthypothetical protein 
Protein accessionYP_582737 
Protein GI94309527 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0275552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG GACAACTGAT TGAGAAGCTG GCTGCCGTAT TCGCGCTGAT CGTCCTGATC 
GGCGGCTCGC TGCTCGTACT CGCGCCATTC GCCACGGCCC TGCTGTGGGG CGCGATCCTC
GCCTACAGCT CCTGGCACCC CTATACCGTG CTGACGCGCT GGCTCGGCAA CCGCCGCGGC
CTGGCCGCGC TGATTTGCGT GCTGATCGCC ACCGTGATCG TGCTCGGGCC GTTCGTCTAC
GCTGGCGCCA GCTTCTCGGC GCACATCGAC GAACTGACCG CGCTGGTCAA TCGCTATACC
GAACACGGTA TCCCGCAACT GCCGGACTGG CTCAGCAGCC TGCCGTTCGT TGGCCCGCAG
ATCGAATCGG CCTGGAACAA GGTCATCACT GCCGACTCCG AGACCGTGGC CAGCCTGCGC
AAGCTGATTG CGCCGGTGGG ACACGCGCTG CTCGGCGCCG GCCTGTCGAT CGGTGCCGGT
CTCGGCCAGC TCGCGCTGTC GATCGTACTG GCGTTTTTCT TCTATACCGG TGGCGAATTG
GCCGTGGACT GGGTACGCGG CGGCATGCGC CGTGTGTCCG GCGACCGGGC CGACCACTTG
CTGTCACTGG CCGGCAGTAC GGTCAAGGGC GTGGTCTACG GCGTGCTCGG CACCGCTTTT
GTGCAAGCCG TGCTGGCCGG CATCGGGTTC TGGATCGCTG GCGTGCCCGG CGCGGCGATT
CTCGGCTTCA TCACGTTCTT CCTTTCCGTC GTGCCGATGG GCCCGCCGCT GGCCTGGATT
CCCGCCGCGT TGTGGCTCTA TCACACCGGC GAGACGGGCT GGGCGATCTT CATGGTGGTC
TGGGGCGCCG CAGTGGTCGG CATGGCCGAC AACGTCATCA AGCCGCTGCT CATCAGCAAG
GGCACCGGCC TGCCGCTCAT CTGGATCATG ATGGGCGTGC TGGGCGGCGC GCTGGCCTTC
GGCTTCCTGG GCGTCTTCAT CGGACCGACC GTGCTGGCCG TGGCGTACGC GCTGCTGCGC
GACTGGACCA TCGGCAACCA GGAACGCGCG AGCGTGACCG CCGTCACGGC GCCGCCGCCG
TCCCAACTGA CCCCGGATGC CTGA
 
Protein sequence
MSSGQLIEKL AAVFALIVLI GGSLLVLAPF ATALLWGAIL AYSSWHPYTV LTRWLGNRRG 
LAALICVLIA TVIVLGPFVY AGASFSAHID ELTALVNRYT EHGIPQLPDW LSSLPFVGPQ
IESAWNKVIT ADSETVASLR KLIAPVGHAL LGAGLSIGAG LGQLALSIVL AFFFYTGGEL
AVDWVRGGMR RVSGDRADHL LSLAGSTVKG VVYGVLGTAF VQAVLAGIGF WIAGVPGAAI
LGFITFFLSV VPMGPPLAWI PAALWLYHTG ETGWAIFMVV WGAAVVGMAD NVIKPLLISK
GTGLPLIWIM MGVLGGALAF GFLGVFIGPT VLAVAYALLR DWTIGNQERA SVTAVTAPPP
SQLTPDA