| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0253 |
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| Symbol | |
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| ID | 4037039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 270722 |
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| End bp | 272437 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637975626 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_582408 |
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| Protein GI | 94309198 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAT TGATCCGCGA GGATGAATCT GCGCCCTCCG GCATTCCGCA GCGATGGGGC
GACATCAATT GGCGCCGCGT CGAACAGAAT GTTCGAGCAA TGCAGATTCG AATTGCGAAG
GCGACACAGG AACGGGACTG GCGCAGGGTG AAAGCTCTGC AGCGGTCTCT GACCCGCTCG
TTTTCCGCCA AGGCATCGGC GGTGCGACGA GTGACGGAGA ACCAAGGTAA ACGGACGGCA
GGTGTCGACC GCGAACTCTG GGACTCGCCT GAAGTTCGAT GGGTAGCCAT TGGACGGTTG
AGACGCCGGG GGTATCGGCC CATGCCATTA CGGAGGGTCT TCATCCCCAA AGCCAACGGA
AAGGAACGCC CTCTGGGTAT CCCGACCATG TTGGACCGGG CCATGCAGGC GCTATATCTG
CTGGCGCTGG AACCGGTGTC CGAGGGGACG AGCGATCCGA ACTCTTATGG GTTCAGGTCC
AATCGTTCTA CTGCGGATGC TATGTCCCAG CTATTCGTCA ACTTATCCAG AAAGGTCTCG
GCCTCATGGA TATTGGAGGC GGACATCCGC GGGTGTTTTG ACCATATCAG TCACGACTGG
CTGGAGCGCA ATGTCCCTAT GGACAAAGCG ATCCTTCGGA AGTGGTTGAA AGCTGGCGTG
GTATTTCAGG GCCAGTTTCA GGCGACCGAA GCCGGTACGC CACAGGGGGG CATCATCTCC
CCGACCTTAG CCAATGTGGC GCTGAACGGA CTGGAACAAC AGCTAGCTCG GTTTCTCGAA
ACCACGCTGG GTGTCAACCA GACCCGGAAG CTCAAAGTAA ATGTTGTGCG CTATGCGGAC
GATTTCGTGA TCACCGGCAG CACGCCGGAA GTTTTGGAAC ACGAGGTGAA GCCGTGGGTG
GAACAGTTCC TCGCAATTCG AGGGTTGTCC CTGTCCACGG AGAAAACGCG GATCGTGAGC
ATTGACGAGG GTTTTGACTT CCTTGGGTGG AATTTCCGGA AGTATTCCGG AACGCTGCTC
ATTAAGCCAA GCAGGAAAAA CGCGCAGGCG TTCTATCGCA AGGTTAAGGA GGTTATCAGT
GCTAACAAGA CGGTAAAGCA GGAGGTCATC ATTCGCCTGC TGAACCCGAT GCTGAGAGGC
TGGGCGCAGT ATCACAGCCC GGTAGTGGCA AAAGAAGCGT TCAGCAAGAT GCAGAGCCGA
GTTTTCCGGG CGCTGCTTTG GTGGACAAAA CGGCGACACA GAGGGAAGAA CGCCGAATGG
GTGCGGAAGA AATACTTCGC TTCGTTTGGT GATCGAAACT GGGTGTTCGG GACTGAGTTT
GTGGAAGACG ATGGGGAACG GCGCTGGCAG GAGTTGTATT CGCTTGCTAG CACGCCCATC
AGACGGCACA AGAAGATTCG GGGGGACTTC AATCCTTTCG ATCCAGCGCA AGAGATGTAT
GGCGAAAATC TACGCCGGGA CCGCATGCTG GAAAGCATGT CTCACCGGAA ACAGTGGATC
AGGCTATATG TCGATCAGCG GGGCTTATGC GCGGTGTGTC AGTGCAAGAT AACCAAAGAG
ACCGGGTGGG ATGACCATCA CATCGTCTAC AGAACCCACG GAGGTTCAGA CGCTCTAGGA
AATCGCGTAT TGCTGCATCC CAACTGCCAC GTCCAAGTAC ACCATCATGG TCGAACCGTT
GTGAAACCGG TGCTGGAGAT GTCCAGCATT TTGTAA
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| Protein sequence | MEALIREDES APSGIPQRWG DINWRRVEQN VRAMQIRIAK ATQERDWRRV KALQRSLTRS
FSAKASAVRR VTENQGKRTA GVDRELWDSP EVRWVAIGRL RRRGYRPMPL RRVFIPKANG
KERPLGIPTM LDRAMQALYL LALEPVSEGT SDPNSYGFRS NRSTADAMSQ LFVNLSRKVS
ASWILEADIR GCFDHISHDW LERNVPMDKA ILRKWLKAGV VFQGQFQATE AGTPQGGIIS
PTLANVALNG LEQQLARFLE TTLGVNQTRK LKVNVVRYAD DFVITGSTPE VLEHEVKPWV
EQFLAIRGLS LSTEKTRIVS IDEGFDFLGW NFRKYSGTLL IKPSRKNAQA FYRKVKEVIS
ANKTVKQEVI IRLLNPMLRG WAQYHSPVVA KEAFSKMQSR VFRALLWWTK RRHRGKNAEW
VRKKYFASFG DRNWVFGTEF VEDDGERRWQ ELYSLASTPI RRHKKIRGDF NPFDPAQEMY
GENLRRDRML ESMSHRKQWI RLYVDQRGLC AVCQCKITKE TGWDDHHIVY RTHGGSDALG
NRVLLHPNCH VQVHHHGRTV VKPVLEMSSI L
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