Gene Rmet_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0112 
Symbol 
ID4036896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp118231 
End bp119160 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID637975484 
Productputative signal peptide protein 
Protein accessionYP_582267 
Protein GI94309057 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTCTC GCGTCGTCTC CTCCATCTGC GGCATCGCGG CCGCGCTCGC TGGCCTGGTC 
TGGTGCGCGA CGGCCATCGC GCAGGTGGCT CTGCCCGCGC ATACGATCGA GCAGGTCGTG
ATGGTGCCGA AGGTCGGCGC GGAGGACACG GTGGACCTGG AAACGACGAT CTTCCGGCCA
CCCGGCGAAG GACGCCGGCC GCTCGTGGTG ATCAACCACG GCAAGACGCC GGGCAAACCG
GCGTTTCAGC GACGTGCGCG CTTTGCCGCG CAGACCGCCG AATTCGTGCG GCGCGGTTTT
GTGGTGGCAC TGCCAATGCG GCAAGGCTTT TCCAAGTCTG GCGGCAAGTA TGTCGGCGGA
AGCTGCGATG TCGGCGCGAA CGGCATGGCG CAGGCGGAGG ATGTGATCGC CGCGCTTGAT
TACCTAGTGC AGCAGCCCTA CGTGGACCCG ACACGCATCG TCGTGATCGG CCAGTCGTTT
GGCGGCCTGT CGACCATGGC GCTGTCCACG ATCGGCTATC CGGGCGTGGT CGGCGTGATC
AACTTCGCTG GCGGGCTGCG CAATGAAAGC TGCAGCGGCT GGGAAAACAA CCTGGTTGAT
GTGTTCGGCG ACTACGGCCG CGGCGCGCGC TATCCGTCGC TCTGGATCTA TGGCGACAAC
GATCGCTTCT GGCCGTGGCC GTTGCCGGAG CGGATGTTCA ACAGCTACAA GGCCAACGTG
AGCGGCGCGG CAAAGGACAC CCACTTTGTC GACGTCGGCG AGTTCGATGG CGATTCACAC
CAGCTTTTCA GCGATAGCGC GGGCATCGCC GTATGGCTGC CAGAGGTGGA AACCTTCTTC
CGCGACCACG GCCTGCCTTT CGACGTGGAG CCGCCGGAGG CAGAGCCCGT CACGCGCGGC
GTGACCAGCA ACCGGCGCCA GAAATCCTGA
 
Protein sequence
MKSRVVSSIC GIAAALAGLV WCATAIAQVA LPAHTIEQVV MVPKVGAEDT VDLETTIFRP 
PGEGRRPLVV INHGKTPGKP AFQRRARFAA QTAEFVRRGF VVALPMRQGF SKSGGKYVGG
SCDVGANGMA QAEDVIAALD YLVQQPYVDP TRIVVIGQSF GGLSTMALST IGYPGVVGVI
NFAGGLRNES CSGWENNLVD VFGDYGRGAR YPSLWIYGDN DRFWPWPLPE RMFNSYKANV
SGAAKDTHFV DVGEFDGDSH QLFSDSAGIA VWLPEVETFF RDHGLPFDVE PPEAEPVTRG
VTSNRRQKS