Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0078 |
Symbol | |
ID | 4036862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 84692 |
End bp | 85948 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637975450 |
Product | patatin |
Protein accession | YP_582233 |
Protein GI | 94309023 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.767923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGC TCTCCGCACA TTCGGCGGAG GCCTCGGCCC GCGCCCGCCA GCGCCAGAGC ACCGCTCTGG TGATGATGGG CGGTGGCGCG CGGGCCGCGT ACCAGGCCGG TGTGCTGTCC GGTATTGCGA AGATCGCCGC GCGTCTTGGG CTGGCACATT GCCCGCTGCC GTTCGGCATC ATCGCCGGGA CATCCGCGGG TGCGATCAAT GGCGCGGGCC TGGCGGTCGG CGCCGCCGAC TTCCGCGCGG CCACGGACAA GCTGTCAGCG CTCTGGCACA GCCTGCACGC CGACGACGTC TACCGGACCG ACGTGCTGCG CGTGGGCGTT TCCGGCGCGC GATGGCTGTC CTCGCTGGCC TTCGGCTGGG TCACGCGGCG GTCATCGCCA CGCGCGCTAT TCGACAATGC GCCGCTCGGC AGCTTCCTGA CCGAGCTGTT CGAGCCGGAG CGCGTCCAGG CCAGTCTGGA CGCCGGCGTG CTGCAAGCCT TCGCGGTCAC GGCGCTGTCG TACAGCACCG GCCGCCATGT CACGTTTTAT CAGTCTCACC GCCGTATCCA CGGATGGCAA CGCAGCCAGC GCATGGCCGT GGAGTCCGCG ATTGGCGTCG ATCACCTGCT GGCATCGGCC TCGATTCCGT TCCTGTTCCC GGCCATACCG CTCGAACTCG AAGGCCATCA CGAATGGTTC GGCGACGGCA CGATGCGGCA GATGTCGCCG CTGTCACCCG CGATTCACCT TGGCGCGTCG CGCATCCTGG CCATCGGCGC CGCGTCGCGC CAGCGGGCCG GCTGGTTCGA TACCGTGCCA TCGGGCGGCT ATCCGTCGCT GGCGCAGGTT GGCGGCCAAG CCCTGGCCAG CATCTTCCTG GATGGCCTGC AGGCCGACAT CGAGCGACTC ATGCACATCA ACCGGCTGCT GTCGCGGATG CCCGAGATGG CCAACGACAC CGAAGGCTGG CGCCCGGTGC AGGTCATGAC GATTTCACCC AGCGAGCCGA TCGAGGCCAT CGCGGCCGAG CACCTGAATC GCCTGCCACG CACCGTGCGC GCGTTCCTGT CGCCACTGGG CGGCACCGAG GCGCGCGGCG CCGCGTTCGC GAGCTATCTG TTGTTCGAAC CCGAGTTCAC CCAGGCCTTG CTGGCGCTGG GCGAACGTGA CGCGGCCGCC CAGGGCGACC AGATCGCCGC ATTCCTCTAT GGAGTGGTGC CGGAAACCAC GCCGGCCAAA AAAGAAGTGA CAGAAGTGTC GCAATAG
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Protein sequence | MSALSAHSAE ASARARQRQS TALVMMGGGA RAAYQAGVLS GIAKIAARLG LAHCPLPFGI IAGTSAGAIN GAGLAVGAAD FRAATDKLSA LWHSLHADDV YRTDVLRVGV SGARWLSSLA FGWVTRRSSP RALFDNAPLG SFLTELFEPE RVQASLDAGV LQAFAVTALS YSTGRHVTFY QSHRRIHGWQ RSQRMAVESA IGVDHLLASA SIPFLFPAIP LELEGHHEWF GDGTMRQMSP LSPAIHLGAS RILAIGAASR QRAGWFDTVP SGGYPSLAQV GGQALASIFL DGLQADIERL MHINRLLSRM PEMANDTEGW RPVQVMTISP SEPIEAIAAE HLNRLPRTVR AFLSPLGGTE ARGAAFASYL LFEPEFTQAL LALGERDAAA QGDQIAAFLY GVVPETTPAK KEVTEVSQ
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