Gene Rmar_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2127 
Symbol 
ID8568788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2479640 
End bp2480761 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content65% 
IMG OID 
Productheat-inducible transcription repressor HrcA 
Protein accessionYP_003291394 
Protein GI268317675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGGAC AGGTGCAGAC GGGACAGATG CGGCGACGGA AGCCACCGTA CCGGGTGGTG 
CGGAAGGATG ATCCGGCCGC GCTGCTGAAC GAGCGGGAGC GGCGGATTCT GCGGCTGGTG
GTCGAGAGCT TCATCGACAC GGCCGGTCCG GTCGGATCGC ACTTTCTGGC CCGGCGGTAT
CCGATCGGCC TGAGCCCGGC CTCCATTCGC AACACGATGA GCGATCTGGA GGAGATGGGC
TACCTGGACC ATCCCTACAC ATCGGCCGGT CGGGTGCCCA CGGACCTGGG TTACCGGACC
TTCGTCGATG CGCTGATGGA CGTGCCCGAG CTGGCTCCGG ACGAACGCCG GCTGCTCCAG
CAGAAGGTGC GGGAGATCGG CAACGATCCG GAGGAGCTGT GGCGGGAGAG CACGCGCCTG
CTCGGCCAGC TTTCCCGGCT GCTGGGCGTG TTGCTGACGC CCCGGCTCTC GACCGGCGTG
CTGGAGCGGC TCGAGGTGGT GCCGCTTTCG TCCACCCGGG CCATGTTCGT GCTCAGCGTG
CGGGGCGGCC TGGTGCGCAC GATCCTTGTG GAGCTGACCT CGGAGCTGAG CCGTCGTGAT
CTGGAACTGG TCGTGGCCCT GCTCAACGAG CGGCTGGCCG GACTCACGCT GGCCGCGATC
CGACAGAGCT GCCATCAACG CCTGCGTGAT CTGGAAGATC GAACCGGCCT GGTACAACTG
GTAATGACCG AAGCGCCTGT GCTTTTCAGC GAACCCAGCG AAGGCCGCGT ACGCTTCGGC
GGCACCCAGT ACATCATGGG CCAGCCGGAA TTTCAGCAGC CGGAAGAGCT GCGTAATCTC
TTTCTGCTGC TGGAAGACGA GGAGGAGCTG GTGCGGCTGC TGGAGGGAAC CGACACGTCC
GATGACGTTG AAGTAGGCCG CGCCCAGGTG TCGATCGGAC GTGAAAATCA GGACGAAAAG
GTAGAAAGAT TCTCGATCGT CACGGCACGC TATCGCCTGG GCGATGCCGT GGGAACCATC
GGAGTGATCG GGCCTACCCG TATGGACTAC CGGCGCGTGC TGGCGCTGGT GCAGGAGATG
GCCCGGCTCC TGAGCCGTCC GATCGATGAG ACGGTCAACT GA
 
Protein sequence
MRGQVQTGQM RRRKPPYRVV RKDDPAALLN ERERRILRLV VESFIDTAGP VGSHFLARRY 
PIGLSPASIR NTMSDLEEMG YLDHPYTSAG RVPTDLGYRT FVDALMDVPE LAPDERRLLQ
QKVREIGNDP EELWRESTRL LGQLSRLLGV LLTPRLSTGV LERLEVVPLS STRAMFVLSV
RGGLVRTILV ELTSELSRRD LELVVALLNE RLAGLTLAAI RQSCHQRLRD LEDRTGLVQL
VMTEAPVLFS EPSEGRVRFG GTQYIMGQPE FQQPEELRNL FLLLEDEEEL VRLLEGTDTS
DDVEVGRAQV SIGRENQDEK VERFSIVTAR YRLGDAVGTI GVIGPTRMDY RRVLALVQEM
ARLLSRPIDE TVN