Gene Rmar_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2078 
Symbol 
ID8568737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp2418948 
End bp2420408 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content65% 
IMG OID 
Productanion transporter 
Protein accessionYP_003291347 
Protein GI268317628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGCA GGCAGCGTCT GGGACTGGTG CTGGGACCGC TGTTTTTTCT GAGTTTCTGG 
CTGGGGCCGA AACCGGCGGC GCTTTCCCCG GAGGCCTGGC ATGCCGGAGC CGTCAGTCTC
TGGATGGCCG TCTGGTGGAT TACGGAGGCC CTTCCGATTC CGGCCACGGC GCTTTTGCCG
ATTGTGCTGT TTCCGGTGCT GGGCGTGCGC TCGATTGGCG AAGCGACGGC CCCCTATGCC
CATCCCATCA TCTTTCTGTT TATGGGAGGA TTCCTCCTGG CACAGGCCAT GCAGCGCTGG
CGATTGCACC GACGGCTGGC GCTGCACATC ATCCGGCGCA TTGGAACGCG GCCGGCGCGG
CTGGTGCTGG GCTTTCTGCT GGCCGGGGCG TTTCTGAGCC TCTGGGTCAG CAACACGGCC
ACGGCGCTGA TGATGTTGCC GATTGCGCTC TCGGTGCTGG AGTTGCTGGA AGAACGGGGG
GCCGTTCAAC CGACCCTTCG CACCTTCGAA GCGGCGCTGG TGCTCAGCAT CGCCTACGGC
TGTAACATCG GCGGCATGGG TACGCTCATC GGCACACCGC CCAATGCGCT GCTGGCAGGT
TTTCTGAGCG AAACGTACGG CTATGAGCTG AGCTTCGCGG CCTGGCTGCC GCTGGGACTG
CCGATCGTGG CGATAGGTCT GTTTCTGACC TACCTGTTGC TGATCTTTGT TCTGTTCCCG
GAAGGACGGC GGCTTCGGGT CGAAGCCAGA GGACTGATTC AGGCGGAACT GTCGGCACTG
GGACCTGTGC AGCCGGCCGA GCGCCGCGTG GCCTGGGTCT TTGCCGTAAC GGCGCTGCTG
TGGATCGTGC GTCCGCTGCT GAGCCGATGG GTGCCGGGGC TTTCGGATGC GGGCATCGCC
ATAGGGGCGG CGCTGATGCT GTTTCTGCTA CCAGCCGGGC AGGGGCGGCG GTTGCTCGAC
TGGGAGTCGG CCCGACATCT GCCCTGGGGC ATCCTGCTGC TCTTTGGCGG TGGCCTCAGC
ATGGCCGACG CGATCACCGA TACGGGGCTG GCGCGCTGGA TCGGCCAGCA GGTGGGTGGG
CTGGCCGGAT GGCCACCGCT TTTGATCGTG CTGCTGGCGA CCGGCACCAT CGTCTTTCTG
ACCGAAATCA CCAGCAATAC GGCGGTAGCC GCCGCTTTTC TACCGGTGCT GGCCTCGGCA
GCCGTGGGAC TGGGGCAAAA TCCCCTGCTG CTGGCGATTC CGGCTACGCT GGGCGCCAGT
TGTGCGTTCA TGTTGCCCGT GGCTACCCCG CCCAACGCCG TGGTGTACAG CACCGGGCGA
ATTACCATGG CAGAGATGGC GCGTGCAGGC TTCTGGTTGA ATCTGTTGTT CATTGTGCTC
CTGACCGCCC TGGCTTTCCT CCTGCTCCCG TTCACGCTGG GAGTAGAGGT GGGGCGCCTC
CCGACATGGG CTCAACCCTG A
 
Protein sequence
MTRRQRLGLV LGPLFFLSFW LGPKPAALSP EAWHAGAVSL WMAVWWITEA LPIPATALLP 
IVLFPVLGVR SIGEATAPYA HPIIFLFMGG FLLAQAMQRW RLHRRLALHI IRRIGTRPAR
LVLGFLLAGA FLSLWVSNTA TALMMLPIAL SVLELLEERG AVQPTLRTFE AALVLSIAYG
CNIGGMGTLI GTPPNALLAG FLSETYGYEL SFAAWLPLGL PIVAIGLFLT YLLLIFVLFP
EGRRLRVEAR GLIQAELSAL GPVQPAERRV AWVFAVTALL WIVRPLLSRW VPGLSDAGIA
IGAALMLFLL PAGQGRRLLD WESARHLPWG ILLLFGGGLS MADAITDTGL ARWIGQQVGG
LAGWPPLLIV LLATGTIVFL TEITSNTAVA AAFLPVLASA AVGLGQNPLL LAIPATLGAS
CAFMLPVATP PNAVVYSTGR ITMAEMARAG FWLNLLFIVL LTALAFLLLP FTLGVEVGRL
PTWAQP