Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1946 |
Symbol | |
ID | 8568603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2273015 |
End bp | 2275249 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003291217 |
Protein GI | 268317498 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGGGC AGATTAAAAA TATCGAGCTG GCGCGGCCGT CCTATCGCTA CCTGGCCTTT GTGGAGGTCG AGACCGACGA CGGCAATCGC TGGCGGCTGC CCATGACGGG CACGGTGGCG CAGTGGTTGC GCGTGGGCCA GCGCGTGCAG CTCGCCGCCG AAAAGCCGCA GCCCGGCTTC GACGACTATT CACTTCGGAC GGCCCGCGTG GCCGTCTGGC CGCTGTTCGA GCGCATCTAC ACGCTGGAGC GTCGTTCGCT TTTTTCCGAC CGGGTGCTTT ACCGCTACCG GCTACGTGCC CGCGAGGCCC GCTACGAGCG CGACTACGCG GCCATCGTCG AACTGGAACA GTACCACTAC GCCTCGCGCG AGCGCGTGCT GGCCCTCTGG TATTGTGAGC GGTGCGGCAC CTATCGGGCC GCCAACGCCC GGCCGGACTG CCCGGCCGGA CACGGCCCCA TGCGTTTCCA CGACCTGAAA GACGCCACCC GTGCCTCGCG CTTTCTGGTG CTGGAACTGC TCGACCGCCA GCCCTACGAA CCCGAGGTGG TGGGCTACGT GCGCGTCGAT CCGCCGCTGC CGCTGCTGCA CCGCCGCCGT CCCGACGGGA CGCTCGACCG CGACATCCGC CGCCGTATCT TTCCGCCGGA ATGGTTCGAC CATCCGTTCC ATCCTAATCA GGACGTGCCG CCCGAAGCCT GGTGGGACGA GCAGGGGAAG GTGCTGGCCC GCGCCCGCTC GCCCGTGGCC CGACTGGCGC GCGTGGTGGT GCATCCGGAC TACCGCGCCG ACGGACTGGG CGTGCAGGCG CTGCACTGCA TGATGGACTG GGTGCGCGAG CGCTGGATAC CCGACATGCG CCTGCCCAAA CGGGCTGTCG AGACCGTGGC GCAGATGGCC CGTTTCCATC CGTTCATGGA GAAGGCCGGG TTCGTCTTTC TGTTCGAGAC GGGCTCGGGC CGTCCGGCGC TCTACCTGCC GCTGGACGAG ACGGCCCGCG AGGCCATCGA GCGCTTTCTG CAGGAAGACG AGCTGGCCCG GGCGCATGGC GGACGGCTCT ATCGCCCGCG CTTTACGCCG GTCGAGCCGC TGAGCGGACC GGTGGTGCTG CACCGGGTGA CCAAAACGTA TCACAACCGG CTAAATCTGG AAGGACTTTC CGAACCGGTG CGTGAGGCGC TGGAAGCTTT CGGCGTGGAA GAGCGCGAGA TTCAGACCTA TGTCTTCCGA GATGCCGACT TCCGGCTGGA GCCGGGCACG GTCAACGCCA TTGTGGGCGC TTCGGGAAGC GGCAAGACCA CACTGCTCCG AATGCTGATC GGGGCGGCCA CCGGGCGGGA CGACCCGCTC TACCGGGCCG ATGAAGGGGA GATCCGGATG CCCGACAACG TGCGGCTGCA GGCGCTGATT CCCGGTGAGG CCGAGCCAGA GCTGGGCACG CAGCCCGTGT TGGAGTCGCT CTATCGGATT ACGGGCGATG CCGCACTGGC CATCGAGATC CTGAACGCGG CCGGCCTGGC CGACGCCGTG CTGTTCCGGG CGCCCTACGC GGAGCTGTCC ACCGGACAGA AAGCCCGCGT GCAACTGGCC TGGGCGCTGG CGCATCGGCC CAATCTGCTG CTCATCGACG AATTTGCGGC GCATCTCGAC CCGCGCATGG CCGCCCGGGT GGGACGCAAG CTGGCCGAAC TGGCCCGCAC GCACGGCATC ACGCTGGTGC TGGTGACGCA CCGGCCTGAA CTGCTTCGCG TGCTGGAGCC CGACACCATC TACATGGTCG GCTATGGCAC GCTCTTTCGG GCCGACGAAC TGCCCGAACT GGGCCTGTTC ATCCGCGAGC CGTACGCCAG CTTCGTCGTG GAGGGTAAGA AAACCTGGGA AATCCGGAAG CACCCCACGC GTGTGCGCGG GCGCATCGGG ATTATCAGCG GAGGCAAGGT GATCGGCACG GCCGAAATCC GGGAAACACG GGGACCGTTT TCCGTGGAGG AGCTCGGCGC CCATGCCGAC AAGCATCTGG CCGACGCCGA AACGCTCGAA GCCTACGCGC AGGGGCGTCC GCTCTACGCC TGGGTGATGG AGCGCGCCCG CCGTCTGGAT CGACCCGTGC CGATCCGTCG GCGTCCCGGT CACCAGCTCT GGGTGCGGTT GCGCGCCGAA GATCAGCAGG GCGCGTCCGA TCAGGACGAA AGCGCCGGAG CTTCGACCGA CACCTCCTTG GGCAAACAGA GGTAG
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Protein sequence | MRGQIKNIEL ARPSYRYLAF VEVETDDGNR WRLPMTGTVA QWLRVGQRVQ LAAEKPQPGF DDYSLRTARV AVWPLFERIY TLERRSLFSD RVLYRYRLRA REARYERDYA AIVELEQYHY ASRERVLALW YCERCGTYRA ANARPDCPAG HGPMRFHDLK DATRASRFLV LELLDRQPYE PEVVGYVRVD PPLPLLHRRR PDGTLDRDIR RRIFPPEWFD HPFHPNQDVP PEAWWDEQGK VLARARSPVA RLARVVVHPD YRADGLGVQA LHCMMDWVRE RWIPDMRLPK RAVETVAQMA RFHPFMEKAG FVFLFETGSG RPALYLPLDE TAREAIERFL QEDELARAHG GRLYRPRFTP VEPLSGPVVL HRVTKTYHNR LNLEGLSEPV REALEAFGVE EREIQTYVFR DADFRLEPGT VNAIVGASGS GKTTLLRMLI GAATGRDDPL YRADEGEIRM PDNVRLQALI PGEAEPELGT QPVLESLYRI TGDAALAIEI LNAAGLADAV LFRAPYAELS TGQKARVQLA WALAHRPNLL LIDEFAAHLD PRMAARVGRK LAELARTHGI TLVLVTHRPE LLRVLEPDTI YMVGYGTLFR ADELPELGLF IREPYASFVV EGKKTWEIRK HPTRVRGRIG IISGGKVIGT AEIRETRGPF SVEELGAHAD KHLADAETLE AYAQGRPLYA WVMERARRLD RPVPIRRRPG HQLWVRLRAE DQQGASDQDE SAGASTDTSL GKQR
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