| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1917 |
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| Symbol | |
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| ID | 8568571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 2237059 |
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| End bp | 2241882 |
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| Gene Length | 4824 bp |
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| Protein Length | 1607 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003291188 |
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| Protein GI | 268317469 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0425764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCGCT TCAGCCATCT GCACTGCCAC ACCCAGTATT CGCTCCTTGA CGGTGCCGCC
CGCATTCAGA CGCTGCTGGA ACGGGCGGCC GAATACGAGA TCGAAGCCGT CGCCATCACC
GACCACGGCA ATCTGTTCGG CGTGCCGGAG TTTTACCGCA CCGCCGAAAA GATCGGCATC
CAGCCAATCA TCGGCTGCGA GTTTTACCTG ACGCCCACCA GTCGCCACGA TCGCAACGAG
CGCACCCGCT ACCATCAGGT GCTGCTCGCC AAAAACGAAA CGGGCTACCG CAACCTGATC
AAGCTCTCCT CGCTCTCCTA CCTGGAAGGC TACTATTACA AACCGCGCAT CGACCACGAG
CTGCTGACGC AATACCACGA AGGGCTGATC GCCACCACCT GCTGCCTGCA GGGCGAGATT
CCGCAGACGA TCCTGCACAA AGGCGAAGAG GCCGCCCGTA AACTTTTCGA GTGGTATCTG
GAGCTGTTCG GCGAGGACTA TTACATCGAG ATTCAGGATC ACGGGCTGCC CGAGCAGAAG
AAGATCAATG CCATTCTGCT CCGGTGGGCC CGTGAGTACG GCGTCAGGGT GATCGCGACA
AACGACGTGC ACTACGTCGA TCGCACCGAC TTCGAACCGC ACGACGTGCT GCTCTGCCTG
CAGACGGGCA AGGACATGTC GGATCCGAGC CGGCTGCGCT TCGACAACGA CCAGTTCTAC
CTGAAAAGTC CGGCCGAGAT GCGCCAGGCG CTGCTGTCCG ACATCGAGCC GCGCCTGGTC
GACGAGATGA TGGCCAACAC CGGCGAGGTG GCCGACAAAT GCCGCTTCCA GCTTCCCACC
GGCAAGCTGC TCATGCCGCA TTACCCGATC CCGCCCGAGT ACAACGGCGA CATGGACGCC
TACCTGCGGG ATCTGGTCTT CGAGGGGGCC CGCCGTCGCT ACGGCGATCC GCTTCCGCAC
GAAGTGGCCG AGCGCCTGGA GCACGAGCTG GCCATCATCA AAAAGATGGG CTTTGCCGGC
TACTTCCTGA TCGTGCAGGA CTTCACCACG GCTGCCCGAC GGCTCGGCGT GCGCGTCGGT
CCCGGACGCG GTTCGGCGGC CGGTAGCGCC GTGGCCTACT GCCTGGGCAT CACGAACATC
GACCCGCTCA AGTACGACCT GCTCTTCGAG CGCTTCCTGA ACCCCGAGCG CGTCTCGATG
CCCGACATCG ACATCGACTT CGACGACCGC GGCCGCGGCA AGGTCATCGA CTACGTCGTG
CAGAAGTACG GCCGGGAGAA CGTCTGCCAG ATCATCACCT TCGGCACGAT GGGCGCCAAG
ATGGCCATTC GCGACGTGGC CCGCGTGCTG GGGATCCCGC TGGCCGAAGC CGACCGCATC
GCCAAGCTCA TCCCCGACGG CCCCAAGGTC ACGCTGGCCC AGGCCTACGA AGAGGTGCCC
GAACTCCGCG CCCTCAAGGA AAGCAACGAT CCGCAGATCC GCAAACTGCT CCACTATGCC
GAGGTGCTCG AAGGCTCGGT GCGCCACACC GGCGTGCATG CGGCCGGGGT CATCATCGCG
CCCGGCCGCG TGAGCGACTA CGTGCCCGTG GCCGTCGCCA AGGGCAAAGA CAACGACACG
GTCACCACCC AGTACGACGG CAAGTGGATC GAGGAGTTCG GGCTTCTCAA AATGGACTTC
CTGGGGCTGA AGACGCTTAC CATCCTGAAC GACGCGCTTC AGCTCATCAA AGAAAACCAC
GGCATCGAGA TCGACCTGGA TCAGATTCCA CTCGACGATC CGAAGACGTT CGAGCTGTTC
CAGCGGGGCG AGACGGTCGC CATCTTCCAG TTTGAATCCG AGGGCATGCG CGAGTGGCTG
CGCAAGCTCA AGCCCACGTC GATCGACGAC CTGATCGCGA TGAACGCGCT CTACCGGCCG
GGCCCCATGG ATCTGATCCC CAACTACATC GCCCGCAAGC ACGGTCTGGA GCCCGTCGAG
TACCCCCATC CTCTGCTCGA ACCCGTCCTG AAGAACACCT ACGGCATTCC CATCTATCAG
GAGCAGGTCA TGCAAATGGC TCAGGTAATG GCCGGCTATA CGCTCGGACA GGCCGACCTG
CTACGCCGCT GCGTTGCTGA AGGTACCCTT ATCGTAGATG CCCGCACCGG CCGCCGCGTC
CCTGTGGAAG AAGTCCAGCC CGGCATGGAA GTCTGGTCGC TGGGCCCCGA CCTCCGCCTG
CACCGCGTTC CTGTACAGGC CCGATTTGAC AACGGAATAC AGACCGTTTA CAAAGTCCGG
ACGCGCACAG GTCGCACCAT CGAACTAACC GCCGAACACC CACTACTGAC GCTGCAGGGC
TGGAAGCATT TGTGCGATTT GAAAGTGGGC GACGCGATCG CCGTTCCGAT TTCCCTTGCT
ACAGAAGGCG ATCTCTCCCC TGATCCAGCC CGCGTTAAAC TTCTGGCCTA CCTGCTGGGC
GATGGCAACA CGGTACATCG CACACCCCGC GGCGACGCCC CGACCGCCCG TTTCTTCACC
TCCTCGCCGG CACTTCGCAA CGACTTTCTG AATGCAGTCC AGACGCTGGG AGGACAGGTT
CGCATTTACA AGCACCCGAT CACCGGCGTC GAGACGATCT ACTGCACCGC TCCGAAAGGA
CAGGCGGACC CTGTGCTCAC GTTAATTCGC GAAGTTGGTC TGATCGGACG TGCCCATGAA
AAGCGCGTCC CCGAGGAGGT CTTTCGCTAC ACGCAGGCCG CCTTGCGTCT TTTCCTGGGC
CGTCTCTGGA GTACGGATGG TTCTATTGAG AAAAAACGCC TGTCTTATTG CTCCACCAGT
ATGGAGTTGA TCGAGGATAT TGCTCATCTA CTTCTTCGAC TGGGCATCAA CACAATACGC
CGTCAGCGCA CTACCACCCA TCGTCCCGCC TTTGAACTGG TTATTACCGA TCAGCGCGAC
ATCGTTCTAT TTGCTCGCCA GATTGGCCCT TACCTTGTCG GGGACAAAAA GAAACGCCTG
AAGGCACTCG TCCGGCAAGC GCTGCAACGC GTGCGCAATC AATCGATTTA TCTGATTCCA
GCAGAAGTCG GTCATTTGGT TCGTGCGGCA AAAGTTAAAA GTGGACTGAG CTGGACACAT
GCCGGAGCTC GGGTCGGGGT GCCCGGCACT TCGCTATCGG CCGGATTGAA TCTGAAAACA
CCACGCCGAG CTCTCTCTCG CCACCGAACG GCGCTGCTCG GACGAGCCTT TGCTGATGAA
ACTTTACTGG CCCTTTCCGA GGGTGAGGTG CTCTGGGATC CCATCGTTGA AATCACCCCA
GTTGGACGCA AACGCGTGTA CGATCTTGCC GTGCCGCCCT TCGCCAACTT CGTTGCCCAG
GACATTGTTG TGCACAACTC CATGGGCAAG AAGAAGGTAG AGGAAATGAA AAAGCATCGG
GAAATCTTTG TAGCCGGTGC GGCCGAGCGA GGCGTTGACG CGGAAACGGC CAATGCGGTC
TTCGACATGA TGGAGAAGTT CGCCGGGTAC GGGTTCAACA AGTCGCACTC GGCGGCCTAT
TCCATCGTGG CCTATCAGAC GGCCTATCTG AAGGCCAACT ACCCGGCCGA GTTCATGGCG
GCGGCGATGA CCAGCGAAAT GGGCGACACG AAGAAGCTGG CCGTGGTGCT CGACGAAGCC
CGCCGCATGG GCCTGGAGCT GCTGCCGCCT TCGATCAACC GGAGCCAGGC ACACTTCACC
GTCGAAGACG GCCGCATTCG CTTCGGCCTG GGCGCCATCA AAGGCGTGGG CCTGGGTGCC
ATCGAGGCCA TTCTCAAAGC CCGCGAAAAG CACGGCCCGT TTCGCACCAT TTTCGACCTG
ATACGTCACC TGGACCTGCG CGTCGTCAAC AAAAAGGTGC TCGAGTCGCT GGCGCGTGCC
GGTGCGCTCG ACGAGCTGGA AGGACACCGG GCCCAGCTCG TCGAGGCGAT CGACCTGGCC
GTCCAGTACG CGCAGAAGGT ACAGGCTGAC CGGATGGCCG GACAGGCCTC GCTCTTCGGC
GAAAGCGGCA CGCGCACGGC CCTGCCGCCG CCCAATCTGC CGGTGGTGCA GCCCTGGTCG
CGTGCCCGCT GCCTGAAGGA GGAGCGCGAG CTGATCGGCT TTTACGTGAC GGGGCACCCG
CTCGAAGCCT ATCGCGCCGA GGTCAACGCC TTTGCCACCA CCACGCTGGC CGAGCTGTCG
CGCACGCTGG AGGAGGCGGA CATGCCTCGC AACGGATCGA CCAACGGACA CACAAACGGC
ACAACGAACG GCCATGCGTA CCGTCCGGCC CGTCCCCGTC ATCGCATCTG CGGTATCATC
ACCGAAGTGC AGCGGCGCAT AGGGCGCAAC GGCCGGCCGC TCGCCTTTGC CTCGATCGAA
GACTTCACCG GTCAGGGCGA GCTGGTCATC TTTTCCTCGG TGCTGGAACG CGTCATGCCC
TATCTGGAAG TGGACGCCGT TGTGCTCGTC GAGGGCCAGG TCGAGGTGCG CGGCGGCAGC
GTCAAGGTGC TGGTGGACGA ACTGTGGCCC ATGTGGAAGG TGCGCGACGA GCTGGTCGAG
GCGCTGGTGG TGCAGCTCGA TCTGGAGCAA GTGCGGCCCG AGCAGCTCGA CCGCTTCCAC
GCGCTCTGCC GCGAGCATGC CGGCCGCTGC AAGCTGTACT TCGACCTGCT CAGCCCCGAC
TTTCCGGGCG GCCGCCAGCG ATTGCTGAGC CGACGCTGCC TGGTCGAGCT CAACGATACG
CTGATGCAAC AGACGCTGCG CCTCTTCGGC GCCGAGGCGA TTCGCCTGGA AAGCCGCCGC
CTGTCGGCCC CGGTGCGTTC ATGA
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| Protein sequence | MHRFSHLHCH TQYSLLDGAA RIQTLLERAA EYEIEAVAIT DHGNLFGVPE FYRTAEKIGI
QPIIGCEFYL TPTSRHDRNE RTRYHQVLLA KNETGYRNLI KLSSLSYLEG YYYKPRIDHE
LLTQYHEGLI ATTCCLQGEI PQTILHKGEE AARKLFEWYL ELFGEDYYIE IQDHGLPEQK
KINAILLRWA REYGVRVIAT NDVHYVDRTD FEPHDVLLCL QTGKDMSDPS RLRFDNDQFY
LKSPAEMRQA LLSDIEPRLV DEMMANTGEV ADKCRFQLPT GKLLMPHYPI PPEYNGDMDA
YLRDLVFEGA RRRYGDPLPH EVAERLEHEL AIIKKMGFAG YFLIVQDFTT AARRLGVRVG
PGRGSAAGSA VAYCLGITNI DPLKYDLLFE RFLNPERVSM PDIDIDFDDR GRGKVIDYVV
QKYGRENVCQ IITFGTMGAK MAIRDVARVL GIPLAEADRI AKLIPDGPKV TLAQAYEEVP
ELRALKESND PQIRKLLHYA EVLEGSVRHT GVHAAGVIIA PGRVSDYVPV AVAKGKDNDT
VTTQYDGKWI EEFGLLKMDF LGLKTLTILN DALQLIKENH GIEIDLDQIP LDDPKTFELF
QRGETVAIFQ FESEGMREWL RKLKPTSIDD LIAMNALYRP GPMDLIPNYI ARKHGLEPVE
YPHPLLEPVL KNTYGIPIYQ EQVMQMAQVM AGYTLGQADL LRRCVAEGTL IVDARTGRRV
PVEEVQPGME VWSLGPDLRL HRVPVQARFD NGIQTVYKVR TRTGRTIELT AEHPLLTLQG
WKHLCDLKVG DAIAVPISLA TEGDLSPDPA RVKLLAYLLG DGNTVHRTPR GDAPTARFFT
SSPALRNDFL NAVQTLGGQV RIYKHPITGV ETIYCTAPKG QADPVLTLIR EVGLIGRAHE
KRVPEEVFRY TQAALRLFLG RLWSTDGSIE KKRLSYCSTS MELIEDIAHL LLRLGINTIR
RQRTTTHRPA FELVITDQRD IVLFARQIGP YLVGDKKKRL KALVRQALQR VRNQSIYLIP
AEVGHLVRAA KVKSGLSWTH AGARVGVPGT SLSAGLNLKT PRRALSRHRT ALLGRAFADE
TLLALSEGEV LWDPIVEITP VGRKRVYDLA VPPFANFVAQ DIVVHNSMGK KKVEEMKKHR
EIFVAGAAER GVDAETANAV FDMMEKFAGY GFNKSHSAAY SIVAYQTAYL KANYPAEFMA
AAMTSEMGDT KKLAVVLDEA RRMGLELLPP SINRSQAHFT VEDGRIRFGL GAIKGVGLGA
IEAILKAREK HGPFRTIFDL IRHLDLRVVN KKVLESLARA GALDELEGHR AQLVEAIDLA
VQYAQKVQAD RMAGQASLFG ESGTRTALPP PNLPVVQPWS RARCLKEERE LIGFYVTGHP
LEAYRAEVNA FATTTLAELS RTLEEADMPR NGSTNGHTNG TTNGHAYRPA RPRHRICGII
TEVQRRIGRN GRPLAFASIE DFTGQGELVI FSSVLERVMP YLEVDAVVLV EGQVEVRGGS
VKVLVDELWP MWKVRDELVE ALVVQLDLEQ VRPEQLDRFH ALCREHAGRC KLYFDLLSPD
FPGGRQRLLS RRCLVELNDT LMQQTLRLFG AEAIRLESRR LSAPVRS
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