Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1762 |
Symbol | |
ID | 8568414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 2061694 |
End bp | 2064765 |
Gene Length | 3072 bp |
Protein Length | 1023 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | TonB-dependent receptor plug |
Protein accession | YP_003291034 |
Protein GI | 268317315 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTACCA TGAGAACATT GCTTTCGCGC ATGCTGGGGC TGAGCCTGCT GCTTGCATGC TGGAATGTAA GCGTTGTCAT TGCGCAACCA CGCACGGTGA CGGGTACCGT CAGTGATGCT ACGACGGGGG AGCCGTTGCC CGGCGTCAAC ATCGTGGTGC TGGGCACGAT GACCGGTACG ACCACCGACG TCGAAGGACG CTATCAGATC GAAGTGCCCG GACCCGAAGC CGTGCTGGTT TTCTCGTTCG TGGGCTACGA ACAGGTGCAG GAGGTGGTAG GCGACCGAAC GGTCATCAAC GTGCGCATGC AACCCACCGT CGAGGTGCTG GAAGAGATCG TCGTGGTCGG CTACGGCGTG CAGCGGCGCG AAGATGTGAC CGGCTCGGTG GCGACGATCG ATGCGACGGA GATCAATCAG GGCGTTTATA CCTCGCCCGA CCAGCTGTTG CAGGGCCAGG TGGCCGGTCT GACGATCATC TCGAACAATG GCGAACCGGG CGCCGGATTG AACATCCGCC TGCGTGGTGG CACCTCCATC AGCGCCAGCA ATGATCCGCT GATCGTCATC GATGGCGTGC CGATCGACAA CGTGCGCCTG ATGCCGGAAG GGGCCGGGAT TGACGGTGCG CCGCCGCCGC CGCGCAACCC CCTGAGCCTG ATCAATCCCA ACGACATCGA ATCGATCACA GTGCTGAAAG ACGCCGCGGC CACCGCCATC TACGGATCGC GAGGTGCGAA CGGCGTGATC CTGATCGAGA CGAAGAAGGG CCGTCAGGGC CAGCTTCAGG TGGACTATGA AGGGTATATT TCGGCGGCCT CTCCTTATAA GAAGCTGGAA TTGCTGAATG GTGAGGAATA TCGGCGGTTC GTTCAGGAGC AGGTACAGGC CGGAAATCTT TCGCAGGATG CGCTGAACGT ACTGGGTGAT GCCAATACGG ACTGGGAAGA AGCGGTTACG CGGACGGGGA TCACGCACTT CCATAATCTG GCCTTTTCGG GCGGTACGAG CCAGACCCGC TACCGGGCCT CGGTCAGCTA CCTGAATCAG CAGGGCCATG TCATCAGCTC CGGGCTGGAA CGTCTGACCG GACGCCTGAA CGCCGACCAT CAGGCCTTCG ACGGGCGGCT GCGGCTTCAG CTCAACCTGA CTTCGTCGTT CCAGCACGAC GACCTGCTGC CCTACAACCA GACGGCCGGC TTCGAAGGCG GGGTGTTTAC GAACGTCTAT CAGATGAATC CCACCTATCC CATCTACGCC GATCAAAACC TGGATGGGAC CCCGGCACTG GATGGCTATT TCGAAATTGC GGACGGCCGG ACCTCGGTGC GCAATCCGGT GGCCATGGCC GAGCAGGTGC TGGACTTCGT AAAGACGACG CGCTCGCTGG GAAACATCGG GGCCGAGCTG GATCTGCTGC CCGGCCTGAC GGCCCGGGTG AACTTCGGCG CCGACCGGGC GCAGTCGAGT CGCCGCCAGT ACTTCCCGCA GCAGAATCCG ACCGGTGCCC AGTACGAAGG GCGGGCGCTG CAGCGCAGCC GGGAACACTC GTCGCTGACG TTCCAGAGCT ACCTGACCTA CCGTAACACA CTTGCCCAGG CGCACAATGT GGAGTTGCTG GGCGGCTACG AGTTCAACGA GTACATGACC GAAGAATTCG GCGTGGAAGG GCAGGGATTC GTCACGGACG TCACCACCTA CAACGCTATG CAGTCGGCCA GCCAGCTGGT CAAAGCCGGG ACGTTTTCCT ACAAGGAAAA AAGCCGACTC ATTTCGTTCT TCACGCGCCT GAACTACAAC TACCAGAGCC GGTACTACCT GACCGGCGTG CTTCGGTACG ACGGTTCCTC GCGCTTTGGC GAAGGGAACA AGTGGGGGCT CTTCCCGGCC ATCTCGGCGG CCTGGCGTAT CAGTGGCGAA CCGTTCATGC AGGGGCTGGA CTGGCTCACC GACCTGCGCT TGAAGGTGGG CTATGGCATC ACGGGTAGTC AGGAGATCGG TAACTACCTG TCGCTGGCGC AGCTTGGCGC CAACGAAAGC CTGCAGGCGG TTTTCGATCA GCAGCCGTAC ACCGGCTTTG CCCCGGTCAA CTATGCGAAT CCGGACCTGA AGTGGGAAGA GACGGCCACC TTCAACATCG GGTTGGATTA CAGCCTGCTG AACGGCAAAT TCTCGGGAAC GATCGAATAC TACGAGAAGA ACACCAGCAA CCTGTTGCTG GAGATCCCTG TGCCGCAGCC GGCGCCGGTC CCGACCCGGA TCGAAAACGT CGGCAAGACG CGCAACCGGG GCCTTGAGTT TTCGCTCGAT GCGCTGGCTG TCGATCGGCC CGGACTGAAC GTGCTCTTCG GGTTGGTCTT CAGCACCAAC CGTAACGAAG TGGTCAGCCT GGGTGGTCGC GATCAGATTA TTACCGGGAC GGTCAGTGGC CGTGGTCAGT CGGACACCTA CGCGCAGATT CTGCTGCCGG GCGAGCCGAT CGGCACCTTC TACGGACCGG TCTTCCTGGG TGTCGATGCC AACGGCCGCC AGCAGTTTGC CGACCTGGAC GGCGACGGTC AGGTCGAGAT CACCGGTGAT GACCGGACCA TCATCGGCAA TGCCCAGCCG GACTTCACCT ACGGCTTCCG TACCAATATC TACTGGGGCA ACTTCGACTT CTACGTGTTC ATCCGGGGCG AACAGGGCCG CGACGTCTTC AACAACACGG CCCTGGTCTA TCAGACGAAG AGCGCCGTGC TCCAGAACCA GAACTTCCTG AAAGCGGCCC TGGACGATCC GGACGCCCTG GACGAACCGG CCATCTACTC CTCGCGCTGG ATCGAAGATG GCTCGTTTAT CCGGCTGGAC AACGTGACGG TCGGCTATAC CTTCAACAAT CTGGGGCCAT GGAGCCGTTA TCTCCGGCGG GCACGTATCT ATGTGTCCGG ACAGAACCTG CTGGTGATTA CCCCTTACAG CGGATACGAT CCGGAGGTTA ACACGAATGC CGGGCTGGCG ACGCTGGGGA TCGACTACAC GAACTATCCC CGGGCGCGCA CCTTTACGGT CGGCATCAGC CTGGGCTTCT AA
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Protein sequence | MGTMRTLLSR MLGLSLLLAC WNVSVVIAQP RTVTGTVSDA TTGEPLPGVN IVVLGTMTGT TTDVEGRYQI EVPGPEAVLV FSFVGYEQVQ EVVGDRTVIN VRMQPTVEVL EEIVVVGYGV QRREDVTGSV ATIDATEINQ GVYTSPDQLL QGQVAGLTII SNNGEPGAGL NIRLRGGTSI SASNDPLIVI DGVPIDNVRL MPEGAGIDGA PPPPRNPLSL INPNDIESIT VLKDAAATAI YGSRGANGVI LIETKKGRQG QLQVDYEGYI SAASPYKKLE LLNGEEYRRF VQEQVQAGNL SQDALNVLGD ANTDWEEAVT RTGITHFHNL AFSGGTSQTR YRASVSYLNQ QGHVISSGLE RLTGRLNADH QAFDGRLRLQ LNLTSSFQHD DLLPYNQTAG FEGGVFTNVY QMNPTYPIYA DQNLDGTPAL DGYFEIADGR TSVRNPVAMA EQVLDFVKTT RSLGNIGAEL DLLPGLTARV NFGADRAQSS RRQYFPQQNP TGAQYEGRAL QRSREHSSLT FQSYLTYRNT LAQAHNVELL GGYEFNEYMT EEFGVEGQGF VTDVTTYNAM QSASQLVKAG TFSYKEKSRL ISFFTRLNYN YQSRYYLTGV LRYDGSSRFG EGNKWGLFPA ISAAWRISGE PFMQGLDWLT DLRLKVGYGI TGSQEIGNYL SLAQLGANES LQAVFDQQPY TGFAPVNYAN PDLKWEETAT FNIGLDYSLL NGKFSGTIEY YEKNTSNLLL EIPVPQPAPV PTRIENVGKT RNRGLEFSLD ALAVDRPGLN VLFGLVFSTN RNEVVSLGGR DQIITGTVSG RGQSDTYAQI LLPGEPIGTF YGPVFLGVDA NGRQQFADLD GDGQVEITGD DRTIIGNAQP DFTYGFRTNI YWGNFDFYVF IRGEQGRDVF NNTALVYQTK SAVLQNQNFL KAALDDPDAL DEPAIYSSRW IEDGSFIRLD NVTVGYTFNN LGPWSRYLRR ARIYVSGQNL LVITPYSGYD PEVNTNAGLA TLGIDYTNYP RARTFTVGIS LGF
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