Gene Rmar_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1640 
Symbol 
ID8568292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1902441 
End bp1903151 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content62% 
IMG OID 
ProductCRISPR-associated protein Cas5 
Protein accessionYP_003290914 
Protein GI268317195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.972711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAG CTCGTCTGGA AGCGGTCAAA GTTGAGCTGG CGGGCCCGGT CGCGTCGTTT 
CGCTATCCGC ATTTTCTGAT CGGCCGCCAG CCCACCTACC CCATGCCGCC GCCCTCTACG 
ATCTACGGCC TGATCAGCGC GGCGCTGGGG CGTTTTCCGG ATCCGGAGGC ACTTCAGTTT 
GCCTACCGGT TTGAGTGCGC GCGTCATCGG GTGGACGATG TGGAGACAAT CTGGTTTGTC 
CAACCCAACA CGGCCACGCG TGGCGAAGCC GCCCGGAAGA ATCTGGAGGC GACGAGCAAC 
ATTCTTCCGC GTGAGTGGCT GGTGCACCCT CGGCTTACAC TGTATGTGAC AGGGGACGAG 
CTGGAGGCAC TTTACCGGGC ATTTCGCAGC CCCTGCTATA TCCTGACACT GGGCCGCTCG 
CAGGAGCTGG TCAGCGTGCG ACGGGTCGAA CGAGTGAGGC TGCACGCCGC GCGTAGAGGA 
TGGCTGGTGC CCGGATTGCT GCCGGTAAGC TTTCGGGAAA AGGCACCGCT GGCTCCCGCT 
TTCTATATGC CGCGCTTCAT TACCCCGAGA AGCCGGCATC AGGTGGCGTG GGACTGGTTT 
CTGGCACTGG ATGCACCGGT CCATCTGGAG TCGGACGCGC CGGAACCGTG CTGGACAGAA 
GCGTCAGGTT CAAACGAACC GCATCTGCTC TATTTCCACG CGTTCCGTTA A
 
Protein sequence
MNEARLEAVK VELAGPVASF RYPHFLIGRQ PTYPMPPPST IYGLISAALG RFPDPEALQF 
AYRFECARHR VDDVETIWFV QPNTATRGEA ARKNLEATSN ILPREWLVHP RLTLYVTGDE 
LEALYRAFRS PCYILTLGRS QELVSVRRVE RVRLHAARRG WLVPGLLPVS FREKAPLAPA 
FYMPRFITPR SRHQVAWDWF LALDAPVHLE SDAPEPCWTE ASGSNEPHLL YFHAFR