Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1481 |
Symbol | |
ID | 8568132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 1728794 |
End bp | 1730293 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | RagB/SusD domain protein |
Protein accession | YP_003290756 |
Protein GI | 268317037 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.476602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCT TTCGTCTATC GACCGCCTGG CTCGTGGCAT GGATCGGACT GACCGGCACG CTGCTGGTCG GCTGCTCCGA TATGCTCGAG CCGGAAGTGT ACAGCGAACT GACACCGGAG ACCTTCTTCT CGTCGGAAGC CGACTTCAAC AGCGCGGTCG TCGCCATCTA CAATGCTTTT TCGACCGACT GGGGTACGAC AGACCTGGGC GACGGCCAGT GGTATGCGGC GCTCTACAAC CACGACCGCA AAACCTACTG GGCCCGCAGC GAAATCACTA CCGACGAATA CGCCACCGGC TGGGACCCGA CCTTCACCAC GTTCTCCTGG GGACCGGCCA CGTTCTCCGG CGTGGAAGCC TCCAATTACA TGAAGATTCG CTACGTGGCC CGCGCTACGG ACGTCATCGA CAAGATCGAA AAATCCACGG CGTCCGTGCC GGAACACATC AAGGCCCGCT ACATCGCCGA GGCCAAGGTG CTCCGGGCCT GGATGATGTA CATCCTGTAC GACTTTTTCG GGCCGGTCAA CGTCAAACTG GATCCCGCCA CGCTCTACAG CACGGAAATC ACGCCGCGTC CTTCCCGCGA AGAATACGTG GCGGCCATCG AGCGGGATCT CCAGGAGGCC ATCCCGAACC TGCCGGACAA ATACAACGAC GATCCCGCCA ACTGGGGACG AGTAAGCAAG GGCGTGGCCC GCATGCTGTT GCTTCGGCTT TACATGCACG AGAAACGCTG GGCCGAGGCG GAAAACGTGG CCCGCGAGCT CATGAACATG GGCTATACGC TGATGCCCGA GTACACGCAG ATCTGTGAGG AGCGGAATCC CGAGCTGATC TACGCGGTGC CAGCCGACGC CTCGTCGCCG AACTGGTACT GGATGGAAAT TCTACCCAAT GACTTCGCCT CGGCACAGGT CGGCGATCAG ACGATCACCG GGCCGCAGGG TTGGGCCGGT TTCTGGATGC CCTGGGACTT TTACGATCAG TATGAAGCCG GCGATAAGCG ACTGTATACG ATCCTCGACA GTTACACGAA CGTGCGCGGG CAGCTCATCA CGCGCCAGCG GATGCGCGGA GCGATTCCGC TCAAGTGCAT CGGCGATCTG GGCACCTCGG CCGGAGCCGA GATCGACTGG CCGGTCTTCC GCTATGCCGA GGTGTTGCTG TCGCTGGCCG AGGCGATCAA CGAGCAGCGC GGCCCCACAG CCGAGGCCCT TCAGTACGTG AACATGGTCC GGGAGCGGGC CGGCGTGGCG CCCTGGACGC CCGATCAGTT TACCTCGAAA GAACAATTGC GCGACTCGCT GCTGGTCGAG CGCGGCCGTG AACTCTACAG CGAGGGAGTC CGTCGCCAGG ACCTGATCCG CCACGGCAAG TTCATCGAGT ACGCGCAGCG TCGCGGCATC AACGCGCAGC CGCACCACGT GCTCTTCCCG ATCCCGCAGT TTGTGATCGA CCAGAGCGGC GGCGTCATCG AACAGAACCC GGGTTACTGA
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Protein sequence | MKRFRLSTAW LVAWIGLTGT LLVGCSDMLE PEVYSELTPE TFFSSEADFN SAVVAIYNAF STDWGTTDLG DGQWYAALYN HDRKTYWARS EITTDEYATG WDPTFTTFSW GPATFSGVEA SNYMKIRYVA RATDVIDKIE KSTASVPEHI KARYIAEAKV LRAWMMYILY DFFGPVNVKL DPATLYSTEI TPRPSREEYV AAIERDLQEA IPNLPDKYND DPANWGRVSK GVARMLLLRL YMHEKRWAEA ENVARELMNM GYTLMPEYTQ ICEERNPELI YAVPADASSP NWYWMEILPN DFASAQVGDQ TITGPQGWAG FWMPWDFYDQ YEAGDKRLYT ILDSYTNVRG QLITRQRMRG AIPLKCIGDL GTSAGAEIDW PVFRYAEVLL SLAEAINEQR GPTAEALQYV NMVRERAGVA PWTPDQFTSK EQLRDSLLVE RGRELYSEGV RRQDLIRHGK FIEYAQRRGI NAQPHHVLFP IPQFVIDQSG GVIEQNPGY
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