Gene Rmar_1413 details

Gene Information

• Locus tag: Rmar_1413
• ID: 8568064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1647124
• End bp: 1649085
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 65%
• Product: arginine decarboxylase
• Protein accession: YP_003290689
• Protein GI: 268316970

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.909421
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGACGAAA CGGCTCAGCC TCTGGAGATC GACATCGAAG CCTGGACGCC CCGGGCGGCC 
GAAGCACTCT ACCATGTCCC GGCATGGGGC GCGGGCTTTT TCCACGTCAA CGAAGCCGGA 
CACGTAGCCG TCCGCCCGCT GGGGCCGGAA GGTCCCTCCA TCGATCTGCT GGAAGTGATC 
GAGCGGCTGC GTGCGCAGCA TGTGCATCCG CCCGTTCTGC TGCGCTTTCA GGATCTGCTG 
CGCACCCGCG TCCAGCAGCT CAACCGGGCG TTTCGCCGCG CCATTGCCGA GACGGGCTAC 
GCCAACACCT ATCGGGGCGT CTATCCGATC AAGGTGAACC AGCTCCGCGA GGTGGTTGAA 
GAAATTCTCG AAGCCGGAGC GCCTTTCTCG TTCGGGCTGG AATGCGGCTC CAAGTCGGAG 
CTGCTGGCCA CGCTGCCCTA CCTGGACCGG GACGACATGC TGCTGATCTG CAACGGCTGT 
AAGGACCGGG CCATGATGCA GCTCATCCTG GCGGGGCAGC GCCTGGGCAA AAAGGTGATC 
CCGGTGATCG AACGCATGGC CGAGTTCCGG CTGCTGCTGG AGGCGCTGGA AGATCGCTCG 
CTACCGCAGG CCGGTGTGCC GGCCATCTTC GGCGTGCGCC TGCGGCTGTC GGCGACGGGC 
GCCGGCCTGT GGTCGGAGTC CGGCGGTGAG ACGTCCAAGT TCGGCCTGTC GCTGTCGGAG 
CTACTGGGCC TGCTCGACCG CATCGGCGAC GGTCACTCGG GGGTGTCGCT GCAGCTGCTG 
CACTTTCACA TGGGCAGCCA GATCGCCCAT CTGGCACACA TTCGCGAGGC GGTCACCGAG 
GCCGCGCGGA TCTATGCCCG GCTGCGCAAG CGTGGGCTGG GCATCACCTA CCTGGACATC 
GGCGGCGGCC TGGGCGTCAC CTACGAGGCG GGCAACCCGG ACGCCCCCGG CAGCATCGAC 
TACTCGCTGG GCGAGTACGC CCATACGGTC GTGGCGACGG TGCAGCAGGT CTGCGAGGCC 
GAAGGCGTCC CGCCGCCCGT TCTGATCTCC GAAAGCGGCC GGGCCCTGAC GGCCTACCAC 
TCGGTCTTCG TGACGGAGGT GCTCGACACC CGTTCCCGAC ACTACGAATT GCCTGCCTGG 
GCCAATGGAG GCATCCATCC TCTGCTGGAG GAGCTGCGCC GGCTCTACGA CGCGGCCGCC 
TCCGAGCCGC TGTCCGCAAC GTACGAACAA CTTGAAGCCG TGCGGCAGCA GGTCAACCGC 
TCGTTTCGGG AAGGGGCCCT GTCTCTGGAG CAGAAAGCGG AAGCCGAACA GCTCTACTGG 
GCTACCTGTG CCCGCCTGTG CGAGCGCCTG CCCCGCTCGT CCGAAGCGCT GGAGACGCTC 
CCCGAAAACC TGCGCCAGCT GCCCACGCGA CTGGCCGATC ATTATCTGTG CAACTTCTCC 
GTCTTTCGCT CGCTGATCGA CCACTGGGCC ATCGGCCAGC ACTTCCCGAT CATGCCCATT 
CACCGCCTGG ATGAACCGCC CACACGCCAC GGCATCCTGA TCGATCTGAC CTGCGACTCC 
GACGGTCAGG TCAGCGATTT CGTCACCCCG GTCGGCGAAA AGCACACGCT TGAACTCCAT 
CCGCTGCGCC CGGACGAGCC CTACTACCTG GGCTTTTTCC TGATGGGTGC CTATCAGGAC 
ATCATGGGCG ATCAACACAA CCTTTTCGGC CGCGTCACCG AAGCGCACGT CTATCTGGAC 
GAAGACGAGC CGGGGAATTT TTACATCGAG CTGATTCTGC CGGGCGCGAC CGTCGAAAAA 
GAACTGGCTC AGGTGCAGTA CTACCCGAAC GACCTCGAGC GTCGCATGAA CCGGCTCATT 
CAGGAGAAGG TGCGCACCGG TGCGCTGCGG CCACGGGAAG GCGTGGAATT GCTGGAACTG 
TACCGGCGCG TCTTTCGGAC TTCCACCTAT CTGGAACACT GA 

 

Protein sequence

MDETAQPLEI DIEAWTPRAA EALYHVPAWG AGFFHVNEAG HVAVRPLGPE GPSIDLLEVI 
ERLRAQHVHP PVLLRFQDLL RTRVQQLNRA FRRAIAETGY ANTYRGVYPI KVNQLREVVE 
EILEAGAPFS FGLECGSKSE LLATLPYLDR DDMLLICNGC KDRAMMQLIL AGQRLGKKVI 
PVIERMAEFR LLLEALEDRS LPQAGVPAIF GVRLRLSATG AGLWSESGGE TSKFGLSLSE 
LLGLLDRIGD GHSGVSLQLL HFHMGSQIAH LAHIREAVTE AARIYARLRK RGLGITYLDI 
GGGLGVTYEA GNPDAPGSID YSLGEYAHTV VATVQQVCEA EGVPPPVLIS ESGRALTAYH 
SVFVTEVLDT RSRHYELPAW ANGGIHPLLE ELRRLYDAAA SEPLSATYEQ LEAVRQQVNR 
SFREGALSLE QKAEAEQLYW ATCARLCERL PRSSEALETL PENLRQLPTR LADHYLCNFS 
VFRSLIDHWA IGQHFPIMPI HRLDEPPTRH GILIDLTCDS DGQVSDFVTP VGEKHTLELH 
PLRPDEPYYL GFFLMGAYQD IMGDQHNLFG RVTEAHVYLD EDEPGNFYIE LILPGATVEK 
ELAQVQYYPN DLERRMNRLI QEKVRTGALR PREGVELLEL YRRVFRTSTY LEH