Gene Rmar_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1317 
Symbol 
ID8567967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1545259 
End bp1546005 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_003290595 
Protein GI268316876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.472506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGCG TTCGGCTTCC CGTCTTCGAA GGTCCCCTGG ACCTGCTGCT CTACTTCATC 
CGACGGGATG AGCTGGACAT CTACGACATT CCGGTCGCCC GCATTGCCGA CGAGTTTCTG
GCCTATGTGC GCCTGATGGA GGAGCTGGAC CTGGACGGCG TGGGGGATTT TCTGTACCTG
GCCGCCGTGC TGCTCCATAT CAAGGCGCAG ATGCTGCTGC CGCGCCCGCC GGCGCCGGCC
GACAACGAAG CGGAGCCGGT CGATCCCCGC CAGGAGCTGG TGGAGCGGCT CCTGAATTAC
CTGCGCTATA AGGACGCCGC CGGACGGCTG GATGCGCAGG TCGAGGCGCG GCAGCAGCTC
TACACGCGGG GCGCGGCGGC CGGGGATGAA GGGGGCGAGC AGGGACCGCC GCCGCTGGCG
CCGGTATCCC TGTTTGAGTT GCTGGATGCA TTGCGGAGAG TGCTGGAGCG TCGGGTCGAA
CCGCCAGCGC ATACCGTCCG GCGAGAGATC TACAGTGTGG AGGCGCAGAT GGATTACGTG
CAGGCGCAGC TGCAGGACGG CCGGGCGTGT CCGTTTGGAG AGCTGGTGGC CGGGCGTCCG
CGTGGATTCG TGATCGCCAC GTTTCTGGCC GTGCTGGAGC TGGCCCGGCA GGGCAGGATA
TGGATTCGGT TGCTGGACGG CCGGGAAGAT TTTCTGGTGG AAGCCTGCGA AGCAACGGCG
ATGGAGGAGG CCGATGTCGC AGCCTGA
 
Protein sequence
MYRVRLPVFE GPLDLLLYFI RRDELDIYDI PVARIADEFL AYVRLMEELD LDGVGDFLYL 
AAVLLHIKAQ MLLPRPPAPA DNEAEPVDPR QELVERLLNY LRYKDAAGRL DAQVEARQQL
YTRGAAAGDE GGEQGPPPLA PVSLFELLDA LRRVLERRVE PPAHTVRREI YSVEAQMDYV
QAQLQDGRAC PFGELVAGRP RGFVIATFLA VLELARQGRI WIRLLDGRED FLVEACEATA
MEEADVAA