Gene Rmar_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1252 
Symbol 
ID8567900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand- 
Start bp1464917 
End bp1465459 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content63% 
IMG OID 
Productnucleoside recognition domain protein 
Protein accessionYP_003290530 
Protein GI268316811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCT TTCGCACACT GATCGAGACG CTTTCGCTGC TGGTGCTTCC ACTGCTGATC 
GTGGGCTTCC CGCTCTACGG GCTGCTGCGT CGCGTGCCCG TTTACGAAGC CTTTGTCGAA 
GGTGCCCGCG AGGGGTTCGA CGTAGCCGTT CGCATCATTC CCTACCTGGT GGCGATTCTG 
TTTGCGATCG GGATGTTTCG GGCCTCGGGT GCCATGGATT TCCTGATCGA GCTGCTCCGT 
CCGGTGCTGA GCCCGCTGCG CATTCCGCCC GAAGTGCTGC CCATGGCCAT TCTGCGTCCG 
CTGACGGGCT CCGGCTCGGC GGCCGTCGTG CTCGACCTGA TCCGCCAGTA CGGAGAGGAC 
TCCCTCATCG TCAAGATCGC GGCCGTGATG TTCGGCTCGA CCGAGACCAC CTTTTACGTG 
CTGGTGGTCT ACTTCGGCGC GGTCAACATC ACCAAGACCC GTCACGCCGT GCCCGCCGGC 
CTGATCGCCG ACGTGGCCGC CATGCTCATG GCCATCTACC TCGTGCAGTG GCTGTTTGCC 
TGA
 
Protein sequence
METFRTLIET LSLLVLPLLI VGFPLYGLLR RVPVYEAFVE GAREGFDVAV RIIPYLVAIL 
FAIGMFRASG AMDFLIELLR PVLSPLRIPP EVLPMAILRP LTGSGSAAVV LDLIRQYGED 
SLIVKIAAVM FGSTETTFYV LVVYFGAVNI TKTRHAVPAG LIADVAAMLM AIYLVQWLFA