| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1133 |
|---|
| Symbol | |
|---|
| ID | 8567779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1311690 |
|---|
| End bp | 1312631 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003290412 |
|---|
| Protein GI | 268316693 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTC GGCGGGTTCT GATAACCGGG GGTGCCGGCT TTATCGGACG ATGGGTGGTG
GCACGGTGTT TGGAGCAGGG GTATCAGGTG GCCGTTTACG ACAACCTGAC GGCCGGCTCC
GTGGATCATC TGCTGGCTTT CTCCGATCGG ATCGACTTCT ACGAGGCCGA CATTCTGGAC
ACGGCTACGC TACAGGCGGT CATGGACGAG ACGCGGCCGG AGATTGTCTT TCATCTGGCC
GCCCTCCATT TCATTCCATA CTGCAACGCG CATCCGCAGG AGACGCTGCG GGTGAACGTC
GAGGGCACCT ACAACGTGCT GGACGCGGCG GCCCGGGGCG GTGTGCGTAC GGCGGTCGTC
GCCTCCAGCG GGGCCATCTA TCCGAGCGTG GAGGGACTGA TTCCCGAAAC GCTCGCGCCG
GCGCCGGTCG ACGTGTACGG TCTCAGCAAA TGGCTCACCG AGCAGGTGGC CGAGCAGTTT
GCGCGCACGA CGGAGATGGC CTGCGTGGCG GCCCGGCTCT TTAACACCTA CGGCCCCTAT
GAAACGAACC CGCATCTGAT CCCCCACATC ATCGCGTCGC TCCAGCAGGG GCCGGCGGTC
GAGCTGGGCA ACATCCACAC GAAACGCGAC TACATCTACG TCGAGGACGT GGCGCGACTG
CTGGTCGCGC TGGGCGAGCG CGTGACCAAG GGCTATGAAG TGGTCAATGT GGGAACGGGA
CGGGAGTACT CGGCGCAGGA GATTATCGAG ACGCTGAGCG AACTGATGGG GCAGCCCATC
GAAATCCGGA TCGATCCGGC GCGGGTGCGT CCGGTGGACA AGCTGCACCA GCGGGCCGAC
ACGACCCGCC TGCAGCAATT GACCGGGATG CTGCCCGAGG TGACGCTGCG CGAAGGCCTG
GCGCGTTTGT TGCAGCACGA AGGTTTGCCC GTGCGGTTGT GA
|
|---|
| Protein sequence | MAIRRVLITG GAGFIGRWVV ARCLEQGYQV AVYDNLTAGS VDHLLAFSDR IDFYEADILD
TATLQAVMDE TRPEIVFHLA ALHFIPYCNA HPQETLRVNV EGTYNVLDAA ARGGVRTAVV
ASSGAIYPSV EGLIPETLAP APVDVYGLSK WLTEQVAEQF ARTTEMACVA ARLFNTYGPY
ETNPHLIPHI IASLQQGPAV ELGNIHTKRD YIYVEDVARL LVALGERVTK GYEVVNVGTG
REYSAQEIIE TLSELMGQPI EIRIDPARVR PVDKLHQRAD TTRLQQLTGM LPEVTLREGL
ARLLQHEGLP VRL
|
|---|
| |