Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1110 |
Symbol | |
ID | 8567756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1286019 |
End bp | 1288607 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | peptidase M14 carboxypeptidase A |
Protein accession | YP_003290389 |
Protein GI | 268316670 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.284775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTGA AGTGTCTGTT CAAACGTTTG CTTCCCGGAA TTCTGCTGGG ATGGAGCCTC TGGAGCTCGC AAGTTGTTCA GAGTCAGCCC GCCTTTCCGC TGCCCCTGGC GTTGCCTGAA TCGGTGTCCT ACGATTCAGC CATCCCGAAG CCGGAAGAGG TGATCGGGCA CGTGGTGGGC ACGCGCCATA CCGCCCCGCA TCAGATCGTG GCCTACTTTC AGGCCGTGGC GGCGGCCAGC GACAGGGTGC TGGTCGAGGA GCACGGCCGC ACCTATGAGG GACGGCCGCT GATCCACGCG ATCGTCTCGG CACCCGAAAA CCTGATGCGT CTGGAGGAAA TCCGCCGGGC CAACCTGCGG CTTTCGGACG ATCCGGCGTC TGTCTCCGAC GCCGAACTAG CCCGTATGCC GGCCGTCGCC TACCTGGGCT ACAGCATTCA TGGGAATGAG GCCAGCGGCT CCGAAGCGTC GCTGCTGACG CTTTACTATC TGGCGGCCGC CCGCGGACCG GAGATCGATT CGCTGCTGGC GCAGGCCGTG CTCATCATCG ATCCCATGTT CAATCCGGAC GGCCGGGATC GATTTGTGGA CTGGGCCAAC CGCAACCGGG GCCGTGTGCC CGTGGCCGAC CCGCAGGACC GCGAACACCT CGAGCCCTGG CCCGGCGGCC GTACCAACCA CTACTGGTTT GACCTGAACC GTGACTGGCT CACCGGCCAG CATCCGGAGT CGCAGGGACG CCTGCGGCTG TTCCATCACT GGCGGCCGCA ATTGCTGACG GACCACCACG AGATGGGGAG CGAGTCCACC TTCTTCTTCA TGCCGGGCGT GCCCAGCCGC ACGCATCCGC TTACGCCGGC CCGCAACCAG GAGCTGACGG CCGCCATCGC CCGCTATCAT GCCGAAGCGC TCAACCGGAT CGGCTCGCTC TACTACTCGG AGGAAGGCTA CGACGACTTC TACTACGGCA AGGGTTCGAC TTACCCGGAC GCCAACGGCG CCGTCGGCAT CCTCTTCGAG CAGGCTTCGT CGCGCGCATT GCTTCGGGAG ACCCGCGACG GCGTGCTTTC CTATGCTTTC ACGATTCGCA ATCAGTTTGC CACTTCGCTT TCGACGCTGC GGGCACTTCG CGCGCTGCGG CTGGAGTTGC TGCGCTACCA GCGCGACTTC TACCGGGAGG CTGAAGCGAT TGCCCGGCGT CTGCCGGTCA AAGCCTACCT TATCGCGCTG GAGCCGGGCC GCACGCGGGC CCAGATGCTG GCCGAGGTGC TCCGGCGGCA CCGCATCCGG GTGTACACGC TGGCCCGCGA CGTGACGGTC AATGGAAAGA CGTTCCGGGC CGGTCAGGCC TACGTGGTGC CCACGCAGCA GCCGCAGGTG CGCATGCTGC AGGCGCTGAT GGAGCGGCGC ACCACGTTCG AGGACTCGCT TTTCTACGAC GTGTCGGCCT GGACGCTGCC GCTGGCCTAC GACGTGGTCT GGGCCGAGTG GCGGCGCGAT CCGTCGGAGC TGCTGGGGAC ACCCGTCGAT TCAGTCCGGC TGGACGGAGG CGAACTGGTG GGGGGCCACT CCGATTATGC CTATCTGATG ACCTGGGATC GGTTCTATGC GCCGGCGGCC CTCTACCGCC TCCAGCAGGC CGGCGTGCGG GCGCGCGTGC TCACCGAGGC GGTCACGCTG CCCGTGGCGG GCAGCCGCCG CACGTTCCCC CCCGGCACCG TGCTGATCCC GGTCGTGCAA CGCGACGGCA AGGGGCCGGC GTCCGACTCG TTGCAGGCCC TGCTGCGCGC GCTGGCCGAC ACCTATCACG TGCGCTTCTT TGCGGTCCAG ACCGGACTTA CCGAGCAGGG ACCCGATCTG GGCACGCGCG ACTACGGTCA GGTGCTCGAA CAGCCTCGCG TGGCGCTGCT GACCGGCGAG GGCACGCGTG CCTACAATGC GGGCGAGGTC TGGCACCTGC TCTCCGAGCG CATGCAGATG CCCGTCTCGC TGCTGGACGT GGACAACGTC GTCTGGGCCG ATCTGAGTCG CTACAACCGG CTGGTGCTGG CCGGCGGCTC GTACAGTGCG CTCCCGGCCG AAAAAATCAA AAACTGGGTG CGGCAGGGAG GCGTGCTGAT CGCCCTGACG GACGCCGTCG ACTGGGTGGT CGCGCAGGGG CTGGTAAGCC TGAAAGTCCG GCCCTTCAAT CTGGATTCGC TGCTACGGCC CTATCCGTAC GGCCAGTTGG AGCGCGCCCG CGGCGCGCAG GTGATCGGCG GTGCCATCCT GGAAGCCCGG CTCGACACCA CGCACCCGCT GGCCTTCGGG CTGGGAGCCA CGCTGCCGGT CTTCCGCACC GAAGAAACCT TTTATGAACC CTCCGAGACG CCGGGCGCCA ACGTGGCCAC CTACACCGAG CAGCCGCTGC GCAGCGGCTA CCTGTCGGCC GCCCGGCAAA AGCAGGCACC GGGTGCGGCC GCCGTTGTGG CGCAGCGCTA CGGACGCGGC CGTATCATCC TGATCATGGA CAACCCGAAC TTCCGCGCCT TCTGGGTGGG TTCGAGCCGA CTGTTTCTGA ATGCGATCTG CTTCGGCGAC GCGTTCTGA
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Protein sequence | MAVKCLFKRL LPGILLGWSL WSSQVVQSQP AFPLPLALPE SVSYDSAIPK PEEVIGHVVG TRHTAPHQIV AYFQAVAAAS DRVLVEEHGR TYEGRPLIHA IVSAPENLMR LEEIRRANLR LSDDPASVSD AELARMPAVA YLGYSIHGNE ASGSEASLLT LYYLAAARGP EIDSLLAQAV LIIDPMFNPD GRDRFVDWAN RNRGRVPVAD PQDREHLEPW PGGRTNHYWF DLNRDWLTGQ HPESQGRLRL FHHWRPQLLT DHHEMGSEST FFFMPGVPSR THPLTPARNQ ELTAAIARYH AEALNRIGSL YYSEEGYDDF YYGKGSTYPD ANGAVGILFE QASSRALLRE TRDGVLSYAF TIRNQFATSL STLRALRALR LELLRYQRDF YREAEAIARR LPVKAYLIAL EPGRTRAQML AEVLRRHRIR VYTLARDVTV NGKTFRAGQA YVVPTQQPQV RMLQALMERR TTFEDSLFYD VSAWTLPLAY DVVWAEWRRD PSELLGTPVD SVRLDGGELV GGHSDYAYLM TWDRFYAPAA LYRLQQAGVR ARVLTEAVTL PVAGSRRTFP PGTVLIPVVQ RDGKGPASDS LQALLRALAD TYHVRFFAVQ TGLTEQGPDL GTRDYGQVLE QPRVALLTGE GTRAYNAGEV WHLLSERMQM PVSLLDVDNV VWADLSRYNR LVLAGGSYSA LPAEKIKNWV RQGGVLIALT DAVDWVVAQG LVSLKVRPFN LDSLLRPYPY GQLERARGAQ VIGGAILEAR LDTTHPLAFG LGATLPVFRT EETFYEPSET PGANVATYTE QPLRSGYLSA ARQKQAPGAA AVVAQRYGRG RIILIMDNPN FRAFWVGSSR LFLNAICFGD AF
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