| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1064 |
|---|
| Symbol | |
|---|
| ID | 8567705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1215465 |
|---|
| End bp | 1216757 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | natural resistance-associated macrophage protein |
|---|
| Protein accession | YP_003290344 |
|---|
| Protein GI | 268316625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.262705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCT GGACGTCCAT CCTGCTCGGG GCCGTTCTGA CGGCGGCCTT CATCGGTCCG
GGCACGGTCA CTACGGCGGC GGCCGCAGGG GCCGGCTACG GGCTGGCCCT GCTCTGGGCG
CTGACGTTCT CGACGTTGGC CTGCTGGACG CTGCAGGAGG CGGCCGCCCG GCTGGCCATC
TGCTCGGGAC GTCCGCTGGC CGAAGCGCTG CGCGATCAGT TCGATGGCTG GAAAGGCGTG
GCCGTCCGAT TGCTGGCGCT GGGCGCCATC GTGCTGGGCA ATGCGGCCTT CGAGGTGGGG
AACGTACTGG GCGCCATGGC CGGGCTGGAG CTGGTATTCG ACGCGCCTCG CCGCCTGCTG
GTGCTCGGCG TAGGTGTAGC CTCAGGTGCC CTGCTCTGGT TCGGCACGCT GCGCATGCTA
CCGCGTGTGC TCGGGGCATT TGTGGCGTTC ATGGGGCTAG CGTTTCTGAT CACCGCCCTG
CAGGTGCATC CGCCCGACGC TGCGCTGCTG CGCCATCTGG TCTGGCCCGT GATGCCGGAG
GGCACCGGGC TGCTGGTGGT GGGGTTGATC GGCACGACCG TCGTACCCTA CAACCTGTTT
CTGGGCTCCG GACTGGCCCG GGGCGAACCG CTGGACGCAA CGCGCTTCGG GCTGGCCGTG
GCCATCGTCG GCGGCGGCCT GATCTCGATG GCCGTGCTGG TAGTCGGCAC GGCGGTGCAC
GGCGCCTTCA CCTACGCGGC CCTTGCCGAC ACGCTCGGTC GGGTGCTGGG CACCTGGGCC
CGCGCCCTGT TCGCGCTGGG ACTCTTTGCG GCCGGCTTCA CGTCGGCGCT GACGGCGCCC
ATCGCCGCCG CCATCACAGC ACGCGGCCTG CTGAGTGCAC CGAACGCCTC GGAGCACGAC
CGCACCTACC GGCTTACCTG GCTGGTGGTA TGGGGCAGCG GCGTGCTCCT GAGTCTGCTG
GACCTGCGGC CGATCCCGGC CATCATCACG GCCCAGGCAC TCAACGGCGT GCTGCTACCG
ATCGTGGCCG TATTTCTGTG GATCGCCACC AACGATCCGC GCCTGATGGG ACGCGACGGC
CTCACTTCGC CCGGGCTGAA CGTGCTCGCC GGCCTCTCGG TCGGGATCGC CGTGTTGCTC
GGCCTGCGCA ACCTGCTGGC CGCATTGCAG GCGGCCGGCG TGGGTCCGGT ACTGTCGGAG
TCGCTGCTGC TGAAACTGGC CGGCGGCATT ACCTTCTTTT TGCTCCTGCT TCTGGGTCGC
TATCTGTATC GACTGCGTCG TCTTGCCCCA TGA
|
|---|
| Protein sequence | MQRWTSILLG AVLTAAFIGP GTVTTAAAAG AGYGLALLWA LTFSTLACWT LQEAAARLAI
CSGRPLAEAL RDQFDGWKGV AVRLLALGAI VLGNAAFEVG NVLGAMAGLE LVFDAPRRLL
VLGVGVASGA LLWFGTLRML PRVLGAFVAF MGLAFLITAL QVHPPDAALL RHLVWPVMPE
GTGLLVVGLI GTTVVPYNLF LGSGLARGEP LDATRFGLAV AIVGGGLISM AVLVVGTAVH
GAFTYAALAD TLGRVLGTWA RALFALGLFA AGFTSALTAP IAAAITARGL LSAPNASEHD
RTYRLTWLVV WGSGVLLSLL DLRPIPAIIT AQALNGVLLP IVAVFLWIAT NDPRLMGRDG
LTSPGLNVLA GLSVGIAVLL GLRNLLAALQ AAGVGPVLSE SLLLKLAGGI TFFLLLLLGR
YLYRLRRLAP
|
|---|
| |