Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_1012 |
Symbol | |
ID | 8567652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1161733 |
End bp | 1164822 |
Gene Length | 3090 bp |
Protein Length | 1029 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_003290294 |
Protein GI | 268316575 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.135444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTGC GCGAGGCGCC GGGGCTGAAG CAGGAAGCGC TGTACCGTGC CCTTTTCGAA ACGACTCAGG ACGCCGTTCT GATCGCCGAC GCCGAAACCG GCCAGATCCT GGAGGCCAAT CCGGCGGCCG AGCGGCTTTT CGGCTACGAT CGGGCTACCC TGTGTCGGAT GCATCAGGAG GAGCTGCATC CGGCCGAACT TGCCGCTTCC TATCGAAAAA AATTCCGCCG GGCCGTCGAG GCCGGCACCT TCCGGGAGCG TGGACTGATC GTGCAGCACG CCGACGGAAG CTGGATTCCC GTCGAACTCT CGGGCCAGGT GCTCGAAGTC GGTGGCCGGA AGTTGATCCA GGGCGTTTTT CGTGACCTGC GCGAGTTGCA GCGCCTGACC GAAACCGAGG CGCTCTACCG CACGCTGTTC GAGACGAGTC TGGCCGGGAT CTACCTGCTG CAGGACGGGC GCGTTGTGGT GGTCAATCCG CAGGCCGCTG CCATGTTCGG CTACACACCC GAGGAGATCG TCGGACGTCC GGTGCTGTCC ATTGTGGCGG AAGAAGACCG CGAGCTGGCC GCCGAAAACA TCCGGCGTCG GCTGGCCGGT GAAGTAGAAG AGATCCGCTA TCGATTCCGG GGGCTGCGCA AGGATGGGAG TCGGTTCTGG GCCGAGGTGC GTGGCCGCCG CATCGTTTAC AACGGGCGGC CGGCCATCCT GGGCACGGTG CTGGACATCG ACGAGCAGGT ACGGGCCATC GAGAAACTGA AACAGAGCGA GGCCCGCTAC CGCCGTCTGT TCGAGCACAG CGTGGCCGGT TTCTATCGGA CCACGGTGGA CGGTCGAATC CTGCGCGTCA ACCCGGCGCT GGCCCGCATG CTGGGCTACG ACGATCCCTC TGAACTGGAA GGCCGTCCGA CCAGCATTCT TTACGTGGAA GAAGCTGATC GCGCGCGCTT TCTGGAGACG CTGCGTCGGG AGGGCCGACT CGTCAACTAT GAGGTTCGGT TGCGCCGAAA GGACGGCCGC GTGCTCTGGG GACTGGAGAA CGTGCTGCTG GTGCAGGAGC CGGACGGCAC CGAGTGCATC GAGGGCACGC TGATCGACGT GACCGAGCTG CTGGAGCAGC GCCGGCGGTA CCTGGGGCTC TACGCGCACA CGGAAGACGC CATCTTCTGG ATTCGCGTCA CGGACGACGG CCGGTTTCTG GTGGAGGCGA CCAACCCCTC GCACCAGCGC AAGACCGGGC TCACGCCCGA AATGCTCTGG AACCGACCGC TGAACAAAAT CCTGCCACCC GACATCGTGG CCCACGTAAC GGGCAACTAC CGGCGCTGCC TGGAAGCCGG CCATCCCATC GAGTACGAGG AGACGCTGGA TCTGCCGGCC GGCCGCCGTA CCTGGCTGAC GCAGCTTGTG CCCATTCCCG ATCCGGACGG CCGCATTCGG CTCATCGCTG GCATCGCCCG CGACATCACT GAGCTGCGGC GGTTGCAGGC GCTGCTGGAG GAGGAGGGGC TGTTTCTGGA GCAGCTCGTC TCCGGTGCTT CGCGCAAGAC GCTCTGCGAG CGGCTCTGCC GCGTGGCCGA GCGCTTCATC GAGGGCGCCC GCGCTTCGGT CTGGATGTAC GACGAAGGGC GGCTCCACCT GTGCGCCGCA CCGGAGCTTC CTGAATCGTT CCGGGCACTC TTCGACGGAC AGCTCATCGG CTCCAATCAG GGATCGCTGG GTGAGGCCGC CTTCAGCCGT CGGCCGGTCT GGGTCTCCGA CATCAAGCAC GATCCGCGCT GGGGAGCCTT TCGGGAGCAA GCGCTGGCGC AGGGGCTTCG CGCCTGCTGG GCCGTTCCCT TCTTCGGGCG GAAAGGCGAA CTGCTGGGCG TGCTGGGCCT GTGCTTCGAC CAGGTGCGCA GCCCCCTGCC CGACGAACAG GCCGTCGTGG CCCGGCTGGC CCACCTGGCC GGCGTGGGCA TGGCCAAGGT GCGGCTCCGG GAAGAACGGG AGCGGCTGGC CCGCGTGGTG GCGCAGATCA CCGAGGGTGT GGCCATCACC GACACGATGG GCAACGTGGT GTGGGTCAAC GAGGCCTTCA CGTGCCTGAC CGGCTACCGC GCGGACGAGG TGCTGGGGAA GAACATCGAG CACCTGCTGC ACGGCCCGGA GACCGACCGC GATACGCTCC GGCGCATGCG GCTGCGTCTG TTGCGGGGAC GTCCGGCGCA CGCCCGGCTG TATCACTACC GCAAAGATGG CTCGGGCTTC TGGGACGAGG TGCACATCGA TCGCCTTTAC GACGAGCAGG GGCAGCACAT CGGCTACATC GGCCTGATGG CCGACGTGAC GGAGCTGGTG GAAGCCGAGC GGCAGTTGAA AGCGGCCAAA GAGCGGGCCG AAGAGGCCAG CCGTCTGAAG TCGGCCTTTC TGGCCAATAT GAGCCACGAG ATCCGAACGC CGCTGACGGG CATTCTGGGC TTTGCCGAAC TGCTCGACGA GGAGCTGGAG ACCCGCCAGC AGGAAGACCT GCGCGAGTTT ACGCACATTA TTGACCGCTC GGCGCGGCGG CTGCTGACGC TGCTCAACGA CATCCTGGAC CTGAGCAAGA TCGAAGCCAA CCGACTGGAG CTCAAGCTGC AGCCCACCGA TGTGGTGGAC GTGGCTCGTC AGGCCGTGCA ACTCATGCAG CCCCTGGCCG AGGAGAAGGG GCTGAAGCTG GAACTACACG CCGAGGAAAA CCTGACGGCC CGGGCCGATC CGAACCGGCT GCATCAGGTG CTGGTCAATC TGCTCTCGAA CGCCATCAAG TTCACCGACG AAGGCCATGT GCGCGTCGAG CTCGGGCAAA AGAAGGGATG GGTCTTACTG GCCGTGGAAG ATACCGGCTG CGGCATCAGT CCCGAGTTCC TGCCGCATCT GTTCGAGCCG TTCCGTCAGG AGCACGAAGG GCTGACGCAG AAACACCAGG GGGTGGGTCT GGGCCTGGCC ATCGTCAAGC GACTGATCGA CCTGATGAGC GGCCAGATCA CCGTGCAGTC CGAGGTGGGC CGGGGAACCC GCTTCGAAAT CCTGCTGCCG AGCGTCGAGC ATGGCCCGGC GGTTAGTTAG
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Protein sequence | MEVREAPGLK QEALYRALFE TTQDAVLIAD AETGQILEAN PAAERLFGYD RATLCRMHQE ELHPAELAAS YRKKFRRAVE AGTFRERGLI VQHADGSWIP VELSGQVLEV GGRKLIQGVF RDLRELQRLT ETEALYRTLF ETSLAGIYLL QDGRVVVVNP QAAAMFGYTP EEIVGRPVLS IVAEEDRELA AENIRRRLAG EVEEIRYRFR GLRKDGSRFW AEVRGRRIVY NGRPAILGTV LDIDEQVRAI EKLKQSEARY RRLFEHSVAG FYRTTVDGRI LRVNPALARM LGYDDPSELE GRPTSILYVE EADRARFLET LRREGRLVNY EVRLRRKDGR VLWGLENVLL VQEPDGTECI EGTLIDVTEL LEQRRRYLGL YAHTEDAIFW IRVTDDGRFL VEATNPSHQR KTGLTPEMLW NRPLNKILPP DIVAHVTGNY RRCLEAGHPI EYEETLDLPA GRRTWLTQLV PIPDPDGRIR LIAGIARDIT ELRRLQALLE EEGLFLEQLV SGASRKTLCE RLCRVAERFI EGARASVWMY DEGRLHLCAA PELPESFRAL FDGQLIGSNQ GSLGEAAFSR RPVWVSDIKH DPRWGAFREQ ALAQGLRACW AVPFFGRKGE LLGVLGLCFD QVRSPLPDEQ AVVARLAHLA GVGMAKVRLR EERERLARVV AQITEGVAIT DTMGNVVWVN EAFTCLTGYR ADEVLGKNIE HLLHGPETDR DTLRRMRLRL LRGRPAHARL YHYRKDGSGF WDEVHIDRLY DEQGQHIGYI GLMADVTELV EAERQLKAAK ERAEEASRLK SAFLANMSHE IRTPLTGILG FAELLDEELE TRQQEDLREF THIIDRSARR LLTLLNDILD LSKIEANRLE LKLQPTDVVD VARQAVQLMQ PLAEEKGLKL ELHAEENLTA RADPNRLHQV LVNLLSNAIK FTDEGHVRVE LGQKKGWVLL AVEDTGCGIS PEFLPHLFEP FRQEHEGLTQ KHQGVGLGLA IVKRLIDLMS GQITVQSEVG RGTRFEILLP SVEHGPAVS
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