Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0956 |
Symbol | |
ID | 8567595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1089348 |
End bp | 1090661 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_003290238 |
Protein GI | 268316519 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCTGGT ATCGTAAACT GCACTGGCAG ATTCTGATCG GGCTGCTGCT GGGTCTGCTT TTCGGCCTGC TGGCCGCGGC GCAGGGATGG AGCGGGTTTG TGACGCGCTG GGTGGCACCG TTCGGGACGA TTTTCATCAA CCTGCTGAAG CTGATCGCCG TCCCGCTTGT GCTGGCCTCG CTGATCGTGG GCGTGACGTC ACTTTCGGAC CTGAAGCGCC TCTCCCGCAT CGGGGGCAAG ACGATCGCCA TCTACATTGC CACGACGGCC GTGGCCATCA CGATCGGTCT GGTGATCGTG AACGTGTTGC GGCCCGGCCA CACCGTGCCG CCCGAGATGC GGACGCGCCT GCAGGAAGCG TACGAGGCCG ACGTCGAGGC GCGGGCCGAG CTGGCCGAGC AGACGCGCCA GCGGGGACCG CTCCAGGTGC TCGTGGACAT CGTGCCCGAG AACGTCTTCA GTGCGGCCTC GGACAACCGC AACATGTTGC AGGTGGTCTT CATCGCGCTG TTTGCCGGGA TCGGGCTGCT GCTCATTCCC GCCGACAAAG CCCGGCCGGT GATCGCCTTT TTCGACGGGG TCAACGCGCT GGTCATCCAA CTGGTCGAGC TCATCATGCG TATCGCCCCG ATCGGGGTCT TCGCGTTGCT GGCCGACACG ATCACGTCTA TTGCCCGCGA CAACCTGCAA CAGGTCTTCG AACTGCTGGC CGCGCTGGGC TACTACAGCC TGGCGGTGGT GCTGGGGCTG GTGATCCACA CGCTGGGAAC TTACCCGCTG CTGCTCAAGC TACTGGCCCG CGTGCCGCTG AAAACGTTCT TTTCCGGCAT CGCGCCGGCG CAGCTTGTGG CTTTCTCTAC TTCGTCAAGC GGGGCCACGC TGCCGGTAAC GATGGAATGT GCCGAGAAGA ACCTGGGCGT ATCGGAGGAA GTCTCGTCGT TCGTGCTGCC GCTGGGCGCC ACCATCAACA TGGACGGCAC AGCGCTCTAT CAGGCCGTGG CGGCCGTGTT CATCGCGCAG ACACTGGGAC TCGGGCTGGA TCTGGGCGCG CAGCTCACGA TTCTGCTGAC GGCCGTCCTG GCTTCGATCG GCACGGCGGC CGTTCCCAGT GCGGGCATCG TGATGCTGGT GATCATCCTG GAGTCGGTCG GCGTGCCCAG CGCGGGCATT GCGCTGATTC TGGGCGTGGA CCGCATTCTG GACATGTGCC GGACCGTGAC GAACGTCACG GGAGATCTGA CGGTGGCCAC GATCGTGGCA GCTACGGAAG GACAACTGGC GTTGCCGGTA CCGGAAACGA AAAGCGCCTC CTGA
|
Protein sequence | MPWYRKLHWQ ILIGLLLGLL FGLLAAAQGW SGFVTRWVAP FGTIFINLLK LIAVPLVLAS LIVGVTSLSD LKRLSRIGGK TIAIYIATTA VAITIGLVIV NVLRPGHTVP PEMRTRLQEA YEADVEARAE LAEQTRQRGP LQVLVDIVPE NVFSAASDNR NMLQVVFIAL FAGIGLLLIP ADKARPVIAF FDGVNALVIQ LVELIMRIAP IGVFALLADT ITSIARDNLQ QVFELLAALG YYSLAVVLGL VIHTLGTYPL LLKLLARVPL KTFFSGIAPA QLVAFSTSSS GATLPVTMEC AEKNLGVSEE VSSFVLPLGA TINMDGTALY QAVAAVFIAQ TLGLGLDLGA QLTILLTAVL ASIGTAAVPS AGIVMLVIIL ESVGVPSAGI ALILGVDRIL DMCRTVTNVT GDLTVATIVA ATEGQLALPV PETKSAS
|
| |