Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0790 |
Symbol | |
ID | 8567428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 911519 |
End bp | 913120 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | flagellar M-ring protein FliF |
Protein accession | YP_003290076 |
Protein GI | 268316357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0592385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAGC AGCTCAAGCA GTTTCTGAGT CGGCTCTCTC CTGGCCAGCG GCTGGCGCTG GGCGCCGTTA CGATCGGCAG CATTCTGTTG CTGCTGGGCA TTGCCTACTG GGCCGGACGG CCGGAATATG CCCTGTTGTT CGGCGGCCTT TCCCCCTCGG ATGCCAGTCG GATTGTCGAG ACGCTCCAGG AAGAGAACGT CCCCTATCAG CTCAAAGAAG GCGGCACGGC CATCTGGGTC CCGCGCGATC GCGTCTACGA ACTGCGCCTC CGGTTTGCCG GAGAAGGGCT GGTCAGCGAC GGACCGGTCG GGTACGAGCT CTTCGACCAG AACACGCTCG GCATGACCGA CTTCATGCAG CGGCTGAATT ACAAACGGGC GCTGGAGGGC GAGCTGGCCC GCACGATCAT GAGCCTGCAG CAGGTCGAGC TGGCCAAGGT CCATCTGGTG TTACCGGAGC GGAGCCCGTT TCGCGAAACC CAGGTGGCTC CCAGTGCTTC GGTGCTGCTC TCACTCAAAA GCGGCGCGCG CCTGACCGAA GAGCAGATCG ATGGCATCAC GGCGCTGGTG GCCGGTGCCG TCGAAGGGCT CGATCCGGCC AACGTGACCG TGCTGGATGC CCGGGGCAAC CTCCTCTCCA ACCCGGACGC CGGCAACGCC GAACTCGCCC TCAGCAGCAC ACAGCTCAAG CTACGTCAGG CGCTCGAGGC CCATCTGACC GAAAAAGGCC AGTCCATGCT CGACCGCGTG CTGGGCCCCG GTAATGCCAT CGTGCGTGTT TCGGCCACGC TGAACTTCGA CCAGGCGGTT ACCGAGCGAC AGCTCATCGA TCCCGAAAGC GCCACGGTCA TCAGCGAGGA ACGCCTCGAA GAGGCCGGCA CCGGGGGCGA AGGGTCTTCG GCCAGCTCCA TGGTGCGCAA CTATGAACTG AGCCGTACGG TCGAACGCAT CCAGCAAAAC GGCGGCGACG TCGAATACCT GACCGTATCG GTCATCCTCA ACCAGCGCTT CGAAGAAGGC CCGGACGGCA CGCCGCAGCC ACGCCCCTAC ACCGAAGACG AGCTCCGGGA GATCGAAGAG CTGGTCAAAA ACGCCGTCGG TTTCCGGCCG GAGCGGGGCG ACCGCTTTGC CATTCATCAG ACGCGCTTCG ACACGCAGAT CGACGACCAG ATCGCGCAGG AACTCCGCGA ACAGCGCCGT CAGGAGCAAC TCAATCTCTA CCTGCGCTAC GGCCTCATGG TGCTGGCCCT GGGCCTGGCC GTCTGGCTGC TGCGCGCGCT GGTCCGTCGC ATGGGCGAGC TGGCCGGCGA GACGCAGGTG CTCATCGGCC GCGTCGACCA GGAGCATGGA GCGCTCGGTG CACCCGAAGG CGCTTCGGGC GCGCTGCAGG GCAAAGCGGT GCCCGGTCTG GAATCCGGCG AATCCGACGA GGAGCTGGTT TTGATCGACG ACATCTACAC CAGTCGGCTA TCGGCCGAAG CCAAGGCCCG CCTGAAGGCC AAGCACATCC TGTTCGAGGA AGTCCAGAAA CAGGTCAACG AAAAACCGGA AGAGGCGGCC GAAATCATCC GGAGCTGGCT GGTAGCCGAC ATGCAGGATT GA
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Protein sequence | MFEQLKQFLS RLSPGQRLAL GAVTIGSILL LLGIAYWAGR PEYALLFGGL SPSDASRIVE TLQEENVPYQ LKEGGTAIWV PRDRVYELRL RFAGEGLVSD GPVGYELFDQ NTLGMTDFMQ RLNYKRALEG ELARTIMSLQ QVELAKVHLV LPERSPFRET QVAPSASVLL SLKSGARLTE EQIDGITALV AGAVEGLDPA NVTVLDARGN LLSNPDAGNA ELALSSTQLK LRQALEAHLT EKGQSMLDRV LGPGNAIVRV SATLNFDQAV TERQLIDPES ATVISEERLE EAGTGGEGSS ASSMVRNYEL SRTVERIQQN GGDVEYLTVS VILNQRFEEG PDGTPQPRPY TEDELREIEE LVKNAVGFRP ERGDRFAIHQ TRFDTQIDDQ IAQELREQRR QEQLNLYLRY GLMVLALGLA VWLLRALVRR MGELAGETQV LIGRVDQEHG ALGAPEGASG ALQGKAVPGL ESGESDEELV LIDDIYTSRL SAEAKARLKA KHILFEEVQK QVNEKPEEAA EIIRSWLVAD MQD
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