Gene Rmar_0485 details

Gene Information

• Locus tag: Rmar_0485
• ID: 8567119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 537526
• End bp: 538323
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 67%
• Product: CRISPR-associated protein, Cse3 family
• Protein accession: YP_003289775
• Protein GI: 268316056

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.363464
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGATA ATGCAAGCCA GGGACGAGCC GACCCGACGC CTTTTCACAT GGTGCAACTC 
TGGCTCGACG TCCGGCGCCT TTACGAACTG GGCCGGATGC TTGATCTTTT CCGGGCGCGC 
CGGCCGGTGA GCCTGTCCTA CCTGGTGCAC TGCGCCCTGG GCGAACTCTT CCAGGCGCAG 
GCCCCGCGGC CGTTTGCCGT CGAGGGGGAA AATCGGCGGG GACCCTGGGT CCGGGTACTC 
GGCTATGCGG ATGTGCCGTG GGAGACGCTG CAGGAGCTTG CCCGGGGGTT TGCCAGCCCG 
GCCGTTTATG CCATCTGCGG CTGGGATCGT GGCGCTTCGA AGCCGATGCC CACGGAGATC 
CCGCGCGGAA TGCGGCTGGC CTTCAGCGTA CGGGTCTGCC CGGTGGTGCG CAAGGCCTCG 
GCCGGGCAAT CGCCCCGGGG GCGGCGCTGG CAGAAAGGTC AGGAACTGGA CGTCTTCCTC 
GATGCGGCCT GGAGCCAACC CGAGGCTGTG CTGGATCGCG AGGCCGTCTA TGCGGAATGG 
CTTCGCCGTC AGATGGCCCG CCCTGAAAAA GGAGGCGCCC GGGTGGAGAC CGTTCGCATG 
ACGCGGTTTT CCATCGAACG AATGACGCGC CGGACGAACG GTTCGTCGCG TTCGGTCACG 
GTCATCCAGC GTCCGGACGT AACCCTCGAA GGGGTGCTGA CCGTCACCGA CAGTGCCGCG 
TTCATGCGAA TGCTCCGCCG GGGCGTCGGA CGCCACACCA GCTTCGGCTA CGGCATGCTC 
AAGCTCCGCC GGGCCTGA 

 

Protein sequence

MKDNASQGRA DPTPFHMVQL WLDVRRLYEL GRMLDLFRAR RPVSLSYLVH CALGELFQAQ 
APRPFAVEGE NRRGPWVRVL GYADVPWETL QELARGFASP AVYAICGWDR GASKPMPTEI 
PRGMRLAFSV RVCPVVRKAS AGQSPRGRRW QKGQELDVFL DAAWSQPEAV LDREAVYAEW 
LRRQMARPEK GGARVETVRM TRFSIERMTR RTNGSSRSVT VIQRPDVTLE GVLTVTDSAA 
FMRMLRRGVG RHTSFGYGML KLRRA