| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0394 |
|---|
| Symbol | |
|---|
| ID | 8567028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 436419 |
|---|
| End bp | 437741 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | Na+ dependent nucleoside transporter domain protein |
|---|
| Protein accession | YP_003289686 |
|---|
| Protein GI | 268315967 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA TTGCCCTGTT GCGGGGGATT CTCGGACTGA CCGTCATTCT GGGGCTGGCC
TACCTGCTCT CCAGCGACCG TCGCCACATC AACTGGCGCA CGGTAGGCGG CGGGCTGCTG
CTGCAGATCG TGCTGGCCAT CTTCATCCTG AAGGGCCGCG AGATGGGCGC CTGGTTTGCC
CCGCTGGGCT GGCCCAAGGA GTTTTTCGCC TGGGTCAGCT CGTTCTTCGT ACTCGTGCTC
AACTTCACGA CCGAGGGCGC CCGCTTCGTG TTCGGCAACC TGGCACTCAG CCCCGGTACC
GATGACAGCC TGGGCTTTTT CTTTGCCTTT CAGGTGCTGC CCACTATCAT CTTTTTCAGC
TCGCTGATGG CCGTGCTCTA CCACCTGGGC GTCATGCAGC GCATCGTGCA GGCGGTAGCC
TGGGTGGTCA GCCGCACGCT GGGCACCAGC GGGGCCGAGT CGCTGTCGGT TTCGGCGAAC
ATCTTCGTCG GACAGACCGA AGCGCCGCTG GTCGTTCGTC CCTATCTGGA AAAAATGACG
CGCTCGGAGC TGATGGCTGT GATGACGGGC GGCATGGCGA CGATCGCAGG CGGGGTGATG
GCGGCCTACA TCCAGCTGCT GGGCGATCCC TATGCGCAGG CCCGCGGGCT GGCGCTCGAA
GTGGCCCGAC TGCAGTTTGC CGAGCACCTG CTGGGCGCCA GCGTGATGGC GGCGCCGGCC
GCGCTGCTAC TGGCCAAAAT GCTGATTCCG GAGACCGGTC AGCCGCTCAC GGCCGGTACC
GTGCGGGTGT CGATCGAGCG CACCACACGC AACGTGATCG ACGCGGCCGC CGCGGGCGCC
TCCGACGGCC TGAAGCTGGC GCTGAACGTC GGCGCCATGC TGATCGCCTT CATCGCGCTC
ATCGCCATGC TCAACTACTT CCTGGGATGG GCCGGCGGCC TGGTGGGCGT CGAGCTGTCG
ATGGAGCGGC TGTTCGGCTG GACGCTGGCG CCCGTGGCCT GGCTGATCGG CGTGCCCTGG
AGCGACGCGG CTCAGTTCGG CGCGCTCGTG GGGACCAAGC TCGTGGTCAA CGAATTCGTG
GCCTACCTGA ACCTCTCGAC GCTCATCGGC CAGAACGCGC TCTCGGACAA GGCCGTCGCG
ATGGCCACGT TCGCGCTGTG CGGCTTCGCG AACTTCTCCT CAATCGCCAT CCAGATCGGC
GGGATCGGAC CGCTGGCACC CTCGCGCATC TCGGAGCTGG CCGAACTGGG CCTCCGCGCC
GTGCTGGCCG GCACGCTGGC CAACATGATG ACAGCTACGA TCGCAGGCGT GCTGATCGGC
TGA
|
|---|
| Protein sequence | MSLIALLRGI LGLTVILGLA YLLSSDRRHI NWRTVGGGLL LQIVLAIFIL KGREMGAWFA
PLGWPKEFFA WVSSFFVLVL NFTTEGARFV FGNLALSPGT DDSLGFFFAF QVLPTIIFFS
SLMAVLYHLG VMQRIVQAVA WVVSRTLGTS GAESLSVSAN IFVGQTEAPL VVRPYLEKMT
RSELMAVMTG GMATIAGGVM AAYIQLLGDP YAQARGLALE VARLQFAEHL LGASVMAAPA
ALLLAKMLIP ETGQPLTAGT VRVSIERTTR NVIDAAAAGA SDGLKLALNV GAMLIAFIAL
IAMLNYFLGW AGGLVGVELS MERLFGWTLA PVAWLIGVPW SDAAQFGALV GTKLVVNEFV
AYLNLSTLIG QNALSDKAVA MATFALCGFA NFSSIAIQIG GIGPLAPSRI SELAELGLRA
VLAGTLANMM TATIAGVLIG
|
|---|
| |