Gene Rmar_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0388 
Symbol 
ID8567022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp431540 
End bp432313 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID 
ProductHaloacid dehalogenase domain protein hydrolase type 3 
Protein accessionYP_003289680 
Protein GI268315961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGGC TGTTCGTTTC CGACATCGAT GGCTGTCTGG CCGAGCCCTA TCGGCCGTTT 
GCCCTGGATC GGTTTCAGGA GCTGGCCCGG CAGGCACATC TGGCCGGACG GCCCGGCGAT
CACCCCGTGC TTCCGGCTTT TACGATCTGC TCCGGCCGGC CCTATCCGTA CGTGGAGGCC
GTGACTCAGG CGCTGGGGCT GCAGGTGCCC GTGCTGTTCG AAGCGGGCGC CGGCATGTTC
GATCCGCGCG AGGTGGTCGT CCACTGGCAT CCGGCCTTCA CCGACGAACT GGCCGAGCAG
GTCGAAGCGC TGCGCCGCTG GATGGTCGAA CGCTGCATTC CGGGCACGTC GCTCATGCTC
GACATCGGCA AGCGCACACA GGCCGGCATG GTCAGCCCCG ACACCGAGGA GATCCTGCGC
TTCGTGCCGA TCGTCGAAGA GTACGTCGCC GCGCATTTTC CGGCCTTCCA TGTGTTTCAC
ACGCATATCT CCATCGACGT AGTGCCGCGC GGCTTTACCA AGCGGGAAGG CCTGCAATGG
CTCATGGAAA CGCTGGGACT CGAAGCGGAC GAGGTGGCGT ACATCGGCGA CTCGAACGGC
GATCTGGGGG CGCTGGCGCT GGTCGGCTAC GCTTTTGCGC CGGCCAATGC CGCCGAGTCG
GTGCGCCAGC AGGTGTCCTA CGTGATGGAT GCGCCCGACA TTGAAGGCGT GCTGGCGGCC
TATCGCTGGT GTATCGCCCA CAACGAGGCG TGCCGAAAGG CCGTGGCTCC GTAG
 
Protein sequence
MIRLFVSDID GCLAEPYRPF ALDRFQELAR QAHLAGRPGD HPVLPAFTIC SGRPYPYVEA 
VTQALGLQVP VLFEAGAGMF DPREVVVHWH PAFTDELAEQ VEALRRWMVE RCIPGTSLML
DIGKRTQAGM VSPDTEEILR FVPIVEEYVA AHFPAFHVFH THISIDVVPR GFTKREGLQW
LMETLGLEAD EVAYIGDSNG DLGALALVGY AFAPANAAES VRQQVSYVMD APDIEGVLAA
YRWCIAHNEA CRKAVAP