Gene Rmar_0369 details

Gene Information

• Locus tag: Rmar_0369
• ID: 8567002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 411429
• End bp: 414839
• Gene Length: 3411 bp
• Protein Length: 1136 aa
• Translation table: 11
• GC content: 65%
• Product: preprotein translocase, SecA subunit
• Protein accession: YP_003289661
• Protein GI: 268315942

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGACT TTCTGAAAAA GCTGTTCGGG GATCGCAACG AGCGGGAGCT GCGGAAACTC 
TGGCCTATTG TTCATAAAGT CAACGAATAC GCCGAGCAGT TCAAGGCGCT CAGCGACGAG 
GAGCTGCGCG CCAAGACCGA CGAGTTCAAG CGCCGCATCA AAGAGGCCGT AGCCGACATC 
GAGGCGCGCA AGGCCGAGAT CGAAGCGCGC CTGCGGGGGG AAGTGCCCGA CATCAGTGGC 
GACGGCCACG CCGAGGTCGA AGAACTCTCG CCCGAAGAGC GCGAGCGCCT CTACGAAGAG 
CTGGACGACC TCGAAAAAGA ATGGCTGGAG CGCGTCGAAC GTCAGCTCGA TGAGCTGTTG 
CCCGAGGCGT TTGCCGTCGT GAAGGAAGCC TGCCGCCGCA TGCTGGGCAA GGAGTGGATG 
GCCGGCGGGC AGAAGATCGT CTGGGACATG GTCCCCTACG ACGTGCAGAT TCTCGGCGGC 
ATCGTGCTGC ACCAGGGCAA GATCGCCGAG ATGAAGACGG GCGAGGGGAA GACGCTCGTG 
GCCGTGATGC CCGTCTATCT GAACGCGCTG GCCGGTCGGG GCGTGCACGT CGTCACGGTC 
AACCCCTACC TGGCGCAGCG CGACGCCGAG TGGATGGGGC CGATCTATGA ATTCCTGGGG 
CTGACCGTCG ATGTCATCGA CAAGTACGAG CCGCACTCCG AAGGGCGGCG CCGCGCCTAT 
CAGGCCGACA TCACCTACGG TACGAACAAC GAGTTCGGGT TCGACTACCT GCGCGACCAC 
TCCTTCGTGA TCGATCCGGA CCAGCTCGTG CAACGCGGCC ACCACTACGC GATCGTCGAC 
GAGGTCGACT CGGTGCTTAT CGACGAGGCG CGCACGCCGC TGATCATCTC GGGTCCGGTG 
CCCCAGTCGG GCGACGAGCG CTTCACCGAG CTCAAGCCGG TCATCGAAAA ACTCGTCTAC 
CTGCAGCAGC GGCTGGTGGC GCAGCTCGTG GCTGAAGCCG AGCAGAAGCT GAAGGAGCGG 
GATAAAGCGC TGGAAGCCGG CGATCGCAAA CGGGCCAGCG AACTGGAAGA GGAGGCCGGA 
CTGGCACTGC TTCGGGCTGC GCGAGGCTTT CCGCGCAACA AGCGCTTCAT GAAGCTCAAG 
ACCGAGCCGG GCGTCGAGAC GCTCCTGCAG CGCACCGAAG CCTTCTACCT GCAGGACAAC 
GCCAAGAACA TGCCCTTCGT CGACGAAGTG CTCTACTTCG CGCTCGACGA AAAGAACCAC 
ACCATCGAAC TTACCGAAAA GGGTCTCGAC GAGATCGCCC GCATCGCCGG CCAGGACCGC 
GACATGTTCG TCCTGCCGGA CCTGGGTGAG GAGACGGCCC GGCTCGAGCA GGAATACCGG 
GAAAAGCTCC GCAGGCTGGA AGAAGAACTG GCGCAGCGCA CCGACCTTTC CGAAGAGAAG 
CGCCAGAACA AGCTGGAAAA CGATCGGCGC CTGCTGCACA AGGAACTGGA GGAGCAGAAG 
CGGGAGCTGT ACAACCGGTA CGCCGAGCGG GCCGAGCGCC TGCATGCGGT CGAGCAGCTG 
CTGCGTGCTT ACACGCTTTA TGAGCGTGAC GTCGAGTATA TCGTCCAGGA CGGCAAGGTC 
CTGATCGTCG ACGAGCACAC GGGCCGTGTG CTGCCCGGCC GCCGCTATTC CGACGGACTG 
CACCAGGCCA TCGAAGCGAA GGAGGGCGTC AAGGTGCAGG CGGCCACGCA GACCTACGCC 
ACGATCACGC TGCAGAACTA CTTCCGCATG TATCACAAGC TGGCCGGCAT GACGGGTACG 
GCCGTCACCG AGGCGGAAGA GTTCTACAAG ATCTACGGCC TGGACGTCAT CGTCATCCCC 
ACGCACAAGC CCGTCATTCG CGTCGATCAC GAGGACCTGG TCTTCCGTAC CAAGCGCGAG 
AAGTACAACG CGGTCATCCA GAAGATCAAG GAGTACCACA GGAAGGGGCA GCCCGTGCTG 
GTGGGCACCA CGTCGGTCGA AGTGTCGGAG ATGCTCAGCC GCATGCTCAA GCGCGAGGGC 
ATCCCGCACA ACGTGCTGAA CGCCCGCCGG GATCGGGCCA AGCAGGAAGC GCTGATCGTG 
GCACAGGCTG GTCAGAAGGG CGCCGTGACG ATCGCCACGA ACATGGCCGG CCGCGGTACC 
GACATCAAGC TCGGGCCGGG CGTCAAGGAA CTGGGCGGGC TGGCCATCAT CGGCACCGAG 
CGCCACGAAA GCCGCCGTAT CGACCTGCAG CTCCGGGGCC GCGCCGGTCG CCAGGGTGAC 
CCCGGCGAAA GCCAGTTCTA CGTGTCGCTC GAAGACGACC TGATGCGCCT GTTCGGCTCC 
GAGCGCATCG CCCGCGTTAT GGACCGCCTC AAGATGGAGG AGGGCGAGGT CATCACGCAT 
CCGTGGGTGA CCAAGAGCAT CGAGCGGGCG CAGAAGAAGG TCGAGCAGAA CAACTTCGCC 
ATCCGCAAGC GGCAGCTCGA GTTCGACGAT GTGCTCGACG CGCAGCGCCG CGTCGTCTAC 
AGCCGTCGCC GGCACGCGCT CACGGGCGAG CGCATCAGCC ACGACGTGCT CGAAATGCTG 
CGCGACGTGC TCGGCCAGAT CGTCGAGCGG CACTACAGAG AAGGCGACCT GGAGGGGCTG 
CGCGACGAAG TGCTGCGCAC GTTCGCCTTC GACTTCGAGA TGACCCCGGA AGAATTTGCC 
CGGCTGGGCG ACGACGGCGT CTTCGACCGG CTCTACCAGG CCGCGCTCGA TTTCTACCGC 
CGCAAGCGCC AGATGCTGGC CGAGCCCTTC TATGAGCGGC TGCAGGCTTT CCTGAACCAG 
GACGGGCTGG AGCAGAAGCC CGACCGCGTC GTGGTGGACT TCACCGACGG CCGCCGCGTG 
CTCCGGGCCG TGGCCCGCGT GGACGAAGCG CTGCGCACGC GCGGCCAGGA GATCAACAAC 
GCGCTGGAAC GGGCCGCGCT GCTGCACTTC ATCGACGAGC ACTGGACCGA ACACCTGCGC 
GAGCTGGACG AACTCAAGGA GGGCATCAAC CTGCGGGCCT TCGGCCAGCG CGACCCGCTC 
GTCGAGTACA AGGTCGAGGG CTTCAAGCTC TTCCAGCAGA CGCTCGACAA GATCAACCGC 
GACGCGATCT CGTTCATCTT CCGGGCCGGA CCGCTGGTGG AGACGCGTCC GGCCGCACCG 
GTGAGCGCGC CGCGTCGGCG CCTGGATCCA TCGCGTGCGC GGACACAGCA CGAGAGCGTC 
GATTCTTACG GCGTGCGCGT GCGGGCGCAG TCGCCGGCCG ACTCGGCCGC GCGGCGCGAT 
CCCACGGTCA AAGAGCAGCC GGTGGTCGTG GGCGAAAAGA TCGGTCGCAA CGATCCCTGT 
CCCTGCGGCA GCGGCAAAAA GTACAAGCAC TGCTGCGGAC GCAACCGCTG A 

 

Protein sequence

MFDFLKKLFG DRNERELRKL WPIVHKVNEY AEQFKALSDE ELRAKTDEFK RRIKEAVADI 
EARKAEIEAR LRGEVPDISG DGHAEVEELS PEERERLYEE LDDLEKEWLE RVERQLDELL 
PEAFAVVKEA CRRMLGKEWM AGGQKIVWDM VPYDVQILGG IVLHQGKIAE MKTGEGKTLV 
AVMPVYLNAL AGRGVHVVTV NPYLAQRDAE WMGPIYEFLG LTVDVIDKYE PHSEGRRRAY 
QADITYGTNN EFGFDYLRDH SFVIDPDQLV QRGHHYAIVD EVDSVLIDEA RTPLIISGPV 
PQSGDERFTE LKPVIEKLVY LQQRLVAQLV AEAEQKLKER DKALEAGDRK RASELEEEAG 
LALLRAARGF PRNKRFMKLK TEPGVETLLQ RTEAFYLQDN AKNMPFVDEV LYFALDEKNH 
TIELTEKGLD EIARIAGQDR DMFVLPDLGE ETARLEQEYR EKLRRLEEEL AQRTDLSEEK 
RQNKLENDRR LLHKELEEQK RELYNRYAER AERLHAVEQL LRAYTLYERD VEYIVQDGKV 
LIVDEHTGRV LPGRRYSDGL HQAIEAKEGV KVQAATQTYA TITLQNYFRM YHKLAGMTGT 
AVTEAEEFYK IYGLDVIVIP THKPVIRVDH EDLVFRTKRE KYNAVIQKIK EYHRKGQPVL 
VGTTSVEVSE MLSRMLKREG IPHNVLNARR DRAKQEALIV AQAGQKGAVT IATNMAGRGT 
DIKLGPGVKE LGGLAIIGTE RHESRRIDLQ LRGRAGRQGD PGESQFYVSL EDDLMRLFGS 
ERIARVMDRL KMEEGEVITH PWVTKSIERA QKKVEQNNFA IRKRQLEFDD VLDAQRRVVY 
SRRRHALTGE RISHDVLEML RDVLGQIVER HYREGDLEGL RDEVLRTFAF DFEMTPEEFA 
RLGDDGVFDR LYQAALDFYR RKRQMLAEPF YERLQAFLNQ DGLEQKPDRV VVDFTDGRRV 
LRAVARVDEA LRTRGQEINN ALERAALLHF IDEHWTEHLR ELDELKEGIN LRAFGQRDPL 
VEYKVEGFKL FQQTLDKINR DAISFIFRAG PLVETRPAAP VSAPRRRLDP SRARTQHESV 
DSYGVRVRAQ SPADSAARRD PTVKEQPVVV GEKIGRNDPC PCGSGKKYKH CCGRNR