Gene Rmar_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0257 
Symbol 
ID8566887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp271886 
End bp273094 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content67% 
IMG OID 
Productaminotransferase class I and II 
Protein accessionYP_003289551 
Protein GI268315832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTGC AGCTCGACAC GTTCAATCCC CGGGTGATGG CCGTGCAGCC GTCGGCCACG 
CTGGCCATGA CGGCACGGGC CAAGCAGTTG CGTCGTGAAG GCAAGCCGGT CATCGGTCTG
AGCGCCGGTG AGCCGGACTT CGACACACCG GCACCCATCG CCGAGGCCGC CATTCAGGCC
ATCCGGGAGG GCTTCACGCA CTACACGGAA AACGCGGGCA TGCTCGAGCT CCGCGAGGCC
ATCTGCCGCA AGCTGGCCGA GGAGAACGGG CTGACCTACG AGCCGGACCA GATCCTCTGC
ACGAACGGGG CCAAGCAGGC CGTGGCGATG GCCATCGAGG TGCTCTGCCG GCCCGAGGAC
GAAGTGCTGA TCCCGGCGCC TTACTGGGTC AGCTACCCCG AGATGGTCCG GCTGGCCGGA
GCCACGCCGG TCATCCTGCC CACCTCGGTC GAAACCGGCT ACCGGCTGAC GCCGGAGCAA
CTGGAGGCGG CCATCACCGA GCGTACGCGC CTGCTGATTC TCTGCTCGCC GTCGAACCCG
ACGGGGACGG TCTACACGCC TGAAGAACTG GAAGCGCTGG CCGACGTGCT GCGCCGCCAC
GAGCACGTCT ACGTGCTTTC GGACGAGATC TACGAATACA TCCTGTTCGA CGCGAAGCAC
GTGTCGTTTG CGAGCCTGCC CGGCATGAAG GAGCGGACGA TCACGGTGAA CGGCTTCTCG
AAGGGATTCG CCATGACGGG TTGGCGGCTG GGCTACCTGG CGGCCGAGCG GCCCATCGTC
AAAGCGGCGG CCAAGGTGCA GAGTCAGTTC ACCTCGGCGC CCTGCAGCAT CTCGCAGAAG
GCCGGGCTGG CCGCGCTGCA GATGGACAAA GGGCCGATCC GGGAGATGGT GGCCGCCTTC
CGCCAGCGGC GCGACTTCGT GCTGGAGCGG CTGCAGGCCA TTGACGGCAT CACCTGTCCG
AAGCCGGAAG GGGCGTTCTA TCTCTTTCCG CAGGTGTCGG CCTTCTACGG GCGGCGCACG
CCGGACGGCC GGACGATCAC CGACAGCGAG TCGCTTTGCC TGTACCTGCT GGAGCAGTGC
CATGTGGCGC TGGTACCCGG CCAGGCCTTC GGCGATCCGA ACGGCGTGCG CATCTCGTAT
GCCGCGTCGA TGGAAAACCT GGCCGAGGCC ATGCGGCGCA TCGAAGCCGG GCTGGCGGCC
CTGCAATGA
 
Protein sequence
MSLQLDTFNP RVMAVQPSAT LAMTARAKQL RREGKPVIGL SAGEPDFDTP APIAEAAIQA 
IREGFTHYTE NAGMLELREA ICRKLAEENG LTYEPDQILC TNGAKQAVAM AIEVLCRPED
EVLIPAPYWV SYPEMVRLAG ATPVILPTSV ETGYRLTPEQ LEAAITERTR LLILCSPSNP
TGTVYTPEEL EALADVLRRH EHVYVLSDEI YEYILFDAKH VSFASLPGMK ERTITVNGFS
KGFAMTGWRL GYLAAERPIV KAAAKVQSQF TSAPCSISQK AGLAALQMDK GPIREMVAAF
RQRRDFVLER LQAIDGITCP KPEGAFYLFP QVSAFYGRRT PDGRTITDSE SLCLYLLEQC
HVALVPGQAF GDPNGVRISY AASMENLAEA MRRIEAGLAA LQ