Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0202 |
Symbol | |
ID | 8566832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 215480 |
End bp | 217096 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003289496 |
Protein GI | 268315777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCGG GACGCCTGCG CCAGCTCGCC TCCGAAACGG CCATCTACGG GCTGTCGTCC ATCCTGGCCC GGCTGCTCAA CTTTCTTCTT TTTCCGTTCT ACTCGCACGT CTTTGCCCCC AACGCCTACG GGGTCATCTC CATCGTCTAT ACGGCCTTTC TGTTTTTCAA CATCGTCTAC CAGTACGGCA TGGAATCGGC CTACCTGCGC TTTGCCGTGG AGGCCGACGA AGACGGACGA CGCCGCGTCT TCAGCACGGC CGTCGGTTCG CTGCTGGGCA CCTCGCTGGT GCTCTCTGCG CTGATCGTAC TGTTCCCTGC GCCCGTGGCC GCCCTGATCG ATCTGGAGGC CCGCTACCGA TGGCTGCTCT ACTACATGGC CGTCATTCTG GTGCTCGACA CGCTGGCCGT CGTGCCGTTT GCCGAGCTGC GGCTGCGCAA CCGCGCCTGG CGCTTTGCGC TGATCCGGCT GGCCGGCGTG GCGGTCAACA TCGGCCTGAA CGTGCTGCTG CTGGTGGGCC TGCACCTGGG CGTGGCGGGC GTCTTCATGG CGAACGCCGC GGCGTCGGCC ACCACCCTGC TGCTGCTGAC GCCGGAGTTC CTGCGGCTCT GGCGTCCGAT GTTCGATGCC GGGCTCTGGC GTCGACTGCT GCGCTTCGGG TTGCCCTTTC TGCCCGGCGG GCTGGGCTAT GCCATCACGG ATCGCATCAA CCTGCTGTTT CTGAAGCGCA TGACGCCGGA GCAGGTGCGC CGGCTCTATG CCGATCGGTT CGATCTGGAG GCGCTCGCCC GCGAGGCCGA ACGGGCGGCC CGCGCCGTGC TGGAACGCGC CGGTGGCGCG TTGACGCCCG AGGTGCAGCA GCGCATGGCC GAGGCCGCTC AGGCCGTCTA CGGCAACCAC GTGGTGGGCG TCTACAACGG CGTGCTCAAG CTGGCCATCT TCCTGATGCT GGTAGTGCAG ATGTTCCGGT TTGCCTGGCA ACCGTTCTTC CTGCAGCACG CCCGCGATCC GGACGCCCCG CAGCTCTTCG CCCGCGTCTT CTCGCTGCTG ACGGCCGTCA GTCTGCTGGT GCTGCTGAGC GTCTCGTTTT TTGCCGCGGA GATCGTCCGT CTGCCGCTGC CCGGCGGCTA CGCGCTGATC AACCCGCGCT ACTGGACGGG GCTGTTCATC GTGCCGGTGG CGCTGCTGGG CTATGTATTT CAGGGCTGGT ACTACGTGTT CTCGGTAGGC GCCTATCTCC GGCACCGCAC AGCGCTGTTC ATTCCGGCCA CGCTGGCCGG GGCGGCCGTG GCGCTGCTGT TCAACGCGCT GCTGGTGCCC CGGCTGGGCA TGCTGGGGGC CGCCTGGGCC ACCACGCTGG CCTATGTCAC CATGGCACTT GTGCTCTGGA GGCTGACCCG CCCGCACTAC GCGGTACCCT ACCGATGGGG TCAGGTGCTG GCGCTGGGCG CCTGGAGCGC GCTCCTCTTC GGCGCCTGGC ATACATGGCC GGCGCTGCAG CGGCCTCTTT TCGAGCTGCT CCTGCTCGTC GGATGGGCGG CCGCCCTGCC CGTGCTCCGG GTGGTCACAC CTGCAGAATT GCGCACGCTA CTCCAACGCC GCTCGCCCTC AGCGTAG
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Protein sequence | MPAGRLRQLA SETAIYGLSS ILARLLNFLL FPFYSHVFAP NAYGVISIVY TAFLFFNIVY QYGMESAYLR FAVEADEDGR RRVFSTAVGS LLGTSLVLSA LIVLFPAPVA ALIDLEARYR WLLYYMAVIL VLDTLAVVPF AELRLRNRAW RFALIRLAGV AVNIGLNVLL LVGLHLGVAG VFMANAAASA TTLLLLTPEF LRLWRPMFDA GLWRRLLRFG LPFLPGGLGY AITDRINLLF LKRMTPEQVR RLYADRFDLE ALAREAERAA RAVLERAGGA LTPEVQQRMA EAAQAVYGNH VVGVYNGVLK LAIFLMLVVQ MFRFAWQPFF LQHARDPDAP QLFARVFSLL TAVSLLVLLS VSFFAAEIVR LPLPGGYALI NPRYWTGLFI VPVALLGYVF QGWYYVFSVG AYLRHRTALF IPATLAGAAV ALLFNALLVP RLGMLGAAWA TTLAYVTMAL VLWRLTRPHY AVPYRWGQVL ALGAWSALLF GAWHTWPALQ RPLFELLLLV GWAAALPVLR VVTPAELRTL LQRRSPSA
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