Gene Rmar_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0085 
Symbol 
ID8566710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp95686 
End bp96744 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content60% 
IMG OID 
ProductWD40 domain protein beta Propeller 
Protein accessionYP_003289382 
Protein GI268315663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.869828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC TGCGGTGGAA GTGGTCGAGT CTCTGGATGG CGGGGCTGTT ACTGGCCGCC 
TGCTCGCTTT TCGAGCCGGA AAAAAAGACG CGTTTTGACT ACGGGGGAGA CCCTCTGCCC
GGCACCGAGA ACCTGTACAA TCTACGTTTA TCCCCGGACG GCGAATGGGT GGCGCTGATC
CGGGCCTATA CGCCGGAACG GCTCGATCCG CCCAATCAAC TCTGGCTGGT CCATCGCGAT
GGTCGGAAGA TGCGTTTTCT GGGACCCAGC ATCGGTAGTG CCGACTGGTC GCCGGATGGT
AAACGGCTCG CATTGACTTA CGAGCCAGGG CTTTGCTGTG ATGTTCATGT GGTGACGCTG
GATCTGGAAA GTGGCCAGGT GGTGGTCTGG ACGGGAGCCG ATACGTTGCT GCTGTCGCAT
CCGACCGCCT CGTTTCCGCA CTGGTTCCAG GACGGCCAAC GACTGCTGGT TTCTGTTATC
GGAAAGGCAT ACGGCCAGCT TTACGAGACA GGCATCTACG TCTTAAACCT CGTACACCGA
CAGGTGGAAG GCCCCCTGGT TAAGTCGATG GTAGGGGCTC AATTAGGCGG GCGGGATCGT
TTTGCGGTGG GGATTATGCC GCAGCCGCAG GGGAGGGTCT ACCGGGAGAA CGCCGTGCGA
TATGAATTTG CCACGGGCGC GTTGACGGTG TTGACGGATT TTGGTCCAGA AGAAGCCTAT
CGATTTGCAG TGTCACCCAG CCCGGTGGAA GACCTGATCG TGCTGGAGCG GCGCGTGGAG
GGTGTGCCAC AGCTTTTTCT GATGGACGGA AAGGGGCGCA TCCTGCGACA ATTGACCGAG
CGGGGCGGCC ACAACCCGCG CTGGAGCTAT GATGGGCGGG CCGTGTTGTT TTTGCGGGAT
GTGGAGGCGG GTCCGGGGGC CCGGAATGTG CCCTTCGTGT ACTGGTTGGA CGAGGACCGT
GAGGAGCCGC TCTGGCCGAT GTTGCCGGAC TCGGTGCCGG CGTTTCCTGT GCTGGACACG
TTGCTTGCCG GGTGCATGCT CTGTGGAAAA CTCCCGTAA
 
Protein sequence
MKKLRWKWSS LWMAGLLLAA CSLFEPEKKT RFDYGGDPLP GTENLYNLRL SPDGEWVALI 
RAYTPERLDP PNQLWLVHRD GRKMRFLGPS IGSADWSPDG KRLALTYEPG LCCDVHVVTL
DLESGQVVVW TGADTLLLSH PTASFPHWFQ DGQRLLVSVI GKAYGQLYET GIYVLNLVHR
QVEGPLVKSM VGAQLGGRDR FAVGIMPQPQ GRVYRENAVR YEFATGALTV LTDFGPEEAY
RFAVSPSPVE DLIVLERRVE GVPQLFLMDG KGRILRQLTE RGGHNPRWSY DGRAVLFLRD
VEAGPGARNV PFVYWLDEDR EEPLWPMLPD SVPAFPVLDT LLAGCMLCGK LP