11 homologs were found in PanDaTox collection
for query gene Rmar_0085 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013501  Rmar_0085  WD40 domain protein beta Propeller  100 
 
 		 352 aa  715    Rhodothermus marinus DSM 4252  Bacteria  normal  0.869828  n/a   
 
 
-
 
NC_013501  Rmar_1844  WD40 domain protein beta Propeller  95.88 
 
 		 340 aa  662    Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_6131  peptidase S9 prolyl oligopeptidase active site domain protein  23.76 
 
 		 667 aa  47.4  0.0003  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_0467  TolB domain-containing protein  28.93 
 
 		 450 aa  47  0.0005  Magnetococcus sp. MC-1  Bacteria  normal  0.84052  normal  0.495381 
 
 
-
 
NC_008347  Mmar10_1114  peptidase S9 prolyl oligopeptidase  26.05 
 
 		 701 aa  46.6  0.0007  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.131603 
 
 
-
 
NC_007954  Sden_2178  WD-40-like beta propeller repeat-containing protein  19.92 
 
 		 292 aa  46.2  0.0008  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_1915  WD40 domain-containing protein  32.74 
 
 		 567 aa  45.1  0.002  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00146751  unclonable  0.0000119274 
 
 
-
 
NC_008609  Ppro_3323  WD40 domain-containing protein  25.96 
 
 		 435 aa  44.3  0.003  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.0000401957  n/a   
 
 
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NC_009380  Strop_0590  peptidase S9B dipeptidylpeptidase IV subunit  34.94 
 
 		 590 aa  44.7  0.003  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
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NC_008009  Acid345_0592  TolB-like protein  25.1 
 
 		 438 aa  43.1  0.007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_2568  peptidase S9 prolyl oligopeptidase active site domain protein  40.43 
 
 		 766 aa  43.1  0.007  Rhodothermus marinus DSM 4252  Bacteria  normal  0.169893  n/a   
 
 
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