| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6877 |
|---|
| Symbol | |
|---|
| ID | 8022460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 329516 |
|---|
| End bp | 331603 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644833739 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002984873 |
|---|
| Protein GI | 241666789 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0668794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATT TCCGTAACGC AGGCATTCTG GCCGGACTGG CGCTCAGCGT CTCAGCCGCG
GCGCTGAATG CATATGCCTC CGAGCCAACC GTGCCACCGG CGCCGGCGGA CTTTCCGGCC
GAAGGCAAGA TCAACTATGT GGCGCGCGAC TCCATCCTGG AGTTCAAGGC GCTGCCCGAA
TATCACGAGC CCGACTGGGT CACGAAGAAT TTCGTCGCCA CCGGCAAGCT GCCGCCGGTC
AAGGATCGCC TGCCGAAGGA GCCGATGGTC TTCAAGACAG GCAATATGCC CGACGGCATC
GGCGTCTACG GCGATACGAT GCGTCACGTC ATTGGCGGCC GGCCGGAAGG CTGGAACTAT
GGCGCCGGCC AGACGCAGGG CTGGGGCGGC ATCGATATCG GTCTCTCCGA ATGCCTGACG
CGCACCGCGC CGCTGTTCCA GGTGCAGGCC TCCGACACCG AGCCGCTGCC GAACCTCGCC
AAGAGCTGGG ATTGGTCGCA AGACGGCCAT AAGCTGACCA TGCACCTGGT CGAAGGCGCC
AAATGGTCCG ACGGCGCGCC GTTCAACGCC GACGACATCA TGTTCTACTG GGACGACGAA
GTCGTCGACC CGAACGTCTC GCCACTCGGC GGCGGCGCCT CGCCGGAAGC TTTCGGTGTG
GGAACGACAC TGAAGAAGGT CGACGATTAC ACCGTCGAAT GGACCTTCAA GGAGGCGTTC
CCGAAGCAAT ATCTCTATAC GATGTCCTAC CCGAACTTCT GCCCGGGTCC GTCGCATATC
TTGAAGCCGA AGCATCCGAA ATATTCGAAG AACACCTACG ACCAGTTCAA GAACGCGTTC
CCGCCGGAGT TCATGAACAT GCCGGTCATG GGCGCCTGGG TGCCGGTGGA ATATCGCTCC
GACGATATCA TCGTCATGCG CCGCAACCCT TACTACTGGA AGGTGGACGA GAAGGGCGAT
CAGTTGCCCT ATCTGAACGA GCTGCACTAC AAGCTTTCGA CCTGGGCGGA CCGCGACGTT
CAGGCCGTGG CGGGATCAGC CGATTTCTCC AACCTCGAGC AGCCGGAAAA CTTCGTCGCC
TCGCTGAAGC GTGCCGCGGA AAAGACCGCA CCCGCCCGTC TCGCCTTCGG CCCGCGCCTC
ATCGGCTACA ATCTTCGCAT GAACTTCTCC GCCAACGGCT GGGGCAACCC GGACGAGCGC
GGTGAGGCGA TCCGCGAGCT CAACCGCAAC GAGGATTTCC GCAAGGCCGT CACCATGGCG
CTCGACCGCA AGGCGATCGG CGACTCGCTG GTCAAGGGGC CGTTCACCGC GATCTATCCC
GGCGGGCTCT CCTCCGGCAC CAGCTTCTAC GACCGCAACT CGACGGTCTA CTATCCCTTC
GATCTTAAGG GCGCCAAGGA GGAACTCGCC AAGGCCGGCC TCAAGGACAC CGACGGCAAC
GGCGTCGTGA ACTTCCCGGC CGGGACGCTC GGCGGCAAGG ATGTCGAAAT CGTCATGCTG
ATCAACAATC AGTACACGAC CGACAAGAGC CTCGCCGAAG GTGTCGTCGG CCAGATGGAG
AAGCTTGGTC TGAAGATCGT CATCAACGCG CTCGACGGCG CCAAGCGTGA CGATGCCCAC
TATGCCGGCC GCTTCGACTG GCTGATCCAG CGCAACACGA CGGAACTGTC GTCGGTGGTG
CAGAACACCG AACAGCTTGC CCCTGTCGGT CCGCGCACCA GCTGGCACCA TCGCGCCGGC
AAGGATGATC AGCTTGATCT GATGCCGTTC GAGAAGGAGC TTGTCGATGT CGTCAACAAG
TTCAGGACGA GCCAAAGCAA CGACGAGCGC GTCGATCTGA TGAAGCAGTA TCAGAAGATC
TCGACGGAGC ACGTCAACAC CGTTGGCCTG ACGGAATATC CGGGCGCCCT GATCGTCAAC
AAGCGGTTCT CTAACGTGCC CCAGGGTACG CCGATCATGA TGTTCAACTG GGCTGAAGAT
TCGGTTATCC GCGAACGCCT GTGGGTGGCC GCCGACAAGC AGGGCAAATA CGAGCTGTTC
CCCGAACAGC TGCCTGGCAA GCCCGGCGAC AAGGGTCCCA TAAACTAG
|
|---|
| Protein sequence | MMNFRNAGIL AGLALSVSAA ALNAYASEPT VPPAPADFPA EGKINYVARD SILEFKALPE
YHEPDWVTKN FVATGKLPPV KDRLPKEPMV FKTGNMPDGI GVYGDTMRHV IGGRPEGWNY
GAGQTQGWGG IDIGLSECLT RTAPLFQVQA SDTEPLPNLA KSWDWSQDGH KLTMHLVEGA
KWSDGAPFNA DDIMFYWDDE VVDPNVSPLG GGASPEAFGV GTTLKKVDDY TVEWTFKEAF
PKQYLYTMSY PNFCPGPSHI LKPKHPKYSK NTYDQFKNAF PPEFMNMPVM GAWVPVEYRS
DDIIVMRRNP YYWKVDEKGD QLPYLNELHY KLSTWADRDV QAVAGSADFS NLEQPENFVA
SLKRAAEKTA PARLAFGPRL IGYNLRMNFS ANGWGNPDER GEAIRELNRN EDFRKAVTMA
LDRKAIGDSL VKGPFTAIYP GGLSSGTSFY DRNSTVYYPF DLKGAKEELA KAGLKDTDGN
GVVNFPAGTL GGKDVEIVML INNQYTTDKS LAEGVVGQME KLGLKIVINA LDGAKRDDAH
YAGRFDWLIQ RNTTELSSVV QNTEQLAPVG PRTSWHHRAG KDDQLDLMPF EKELVDVVNK
FRTSQSNDER VDLMKQYQKI STEHVNTVGL TEYPGALIVN KRFSNVPQGT PIMMFNWAED
SVIRERLWVA ADKQGKYELF PEQLPGKPGD KGPIN
|
|---|
| |