Gene Rleg_6798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6798 
Symbol 
ID8022728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012858 
Strand
Start bp239637 
End bp240341 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID644833665 
Product3-oxoacid CoA-transferase, B subunit 
Protein accessionYP_002984799 
Protein GI241666715 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA ACACCCGCCC CATCAACACC CGCGAAGACA TCAAGCTTTC CAATGCGCAG 
ATCGCCTGGC GCGCCGCGCA GGATATTGCC GACGGCGCCT ATGTGAACCT CGGCATCGGC
TTTCCCGAAA TGGTCGCCCG TTATCAGCCC CCCGGCCGTC AGGCGATCTT CCACACCGAA
AACGGCATTC TGAACTTCGG CGAGCCGCCG GCGGCAGGCG AGGAGGATTG GGACCTGATC
AATGCTGGCA AGAAGGCGGT AACGCTGAAG CCGGGTGCCG CCTTCTTCCA TCACGCCGAC
AGCTTCGCCA TGGTGCGCGG CGGCCATCTC GACGTCGCGA TCCTCGGCGC CTATCAGGTT
GCCCAGAGCG GCGACCTTGC CAACTGGCGG GTGGGCAGCA AAGGCGTGCC GGCCGTCGGC
GGCGCCATGG ACCTGGTGCA CGGCGCCAAG CAGGTCTGCG TCATTACCGA GCACGTCACT
AAGACAGGCG AGCCGAAACT GGTGGAGACA TGCACCTTCC CGCTGACCGG CGTTGCCTGC
ATCACCCGCG TCTATACCAG CCACGCCGTC GTCGACATCG TCAACGGACG TTTCATCCTG
CGCGAGAAAC TGGCCGCGAT GTCGCAGGAG GAATTGCAGG CGATGACCGG TGCGCCGCTG
CACGTCGAAG GGCCGGTTGC CGACCTTGTC GTCCCGAAAC TCTGA
 
Protein sequence
MTINTRPINT REDIKLSNAQ IAWRAAQDIA DGAYVNLGIG FPEMVARYQP PGRQAIFHTE 
NGILNFGEPP AAGEEDWDLI NAGKKAVTLK PGAAFFHHAD SFAMVRGGHL DVAILGAYQV
AQSGDLANWR VGSKGVPAVG GAMDLVHGAK QVCVITEHVT KTGEPKLVET CTFPLTGVAC
ITRVYTSHAV VDIVNGRFIL REKLAAMSQE ELQAMTGAPL HVEGPVADLV VPKL