| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6701 |
|---|
| Symbol | |
|---|
| ID | 8022611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 129660 |
|---|
| End bp | 130517 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644833568 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002984702 |
|---|
| Protein GI | 241666618 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.539155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.142405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAATT ATCCCACACC GCCTTTCCCG TCCCAGAAGC AGCCGATGCC GGGTTTCACG
GCACAGATGG ACCCGGTTCC CGACCATGGC GAAAAGAGCT ATCGCGGTTC CGAGCGGCTG
AAGGGCAAGC GGGCGATCAT CACCGGCGGC GATAGCGGCA TTGGCCGGGC AGTGGCGATC
GCCTATGCCA GGGAGGGTGC CGATCTGCTG CTGTCCTATC TCGACGAGGA TGAGGATGCC
GATGAGACGA AACGGCTGGT CGAGCAGGCC GGACGCAAGG CTATCCTCGT CAGCGGTGAC
ATCCAGGATC CCGCCCACTG CAGACAGATC GTCGAGACGG CGGTCAAGGA GCTCGGCGGT
ATCGACATTC TCGTCAACAA TGCCGCACAT CAGGCAAGCT TCAAGAGCAT CGACGAGATC
AGTGATGAAG AGTGGGAACT GACCTTCAAG GTCAATATCC ATTCGATGTT CTACCTGACC
AAGGCGGCCG TCGCCCATAT GAAGCCCGGC AGCGCCATCA TCAACACGGC TTCGATCAAT
TCGGACAATC CGAACCCGAC GCTGCTTGCC TATGCGACGA CCAAGGGCGC GATCCAGAAT
TTCACCGCCG GCCTTGCTCA GCTTCTGGCC GAGAAAGGCA TTCGCGCCAA TGCGGTGGCG
CCAGGGCCCA TCTGGACGCC GCTCATCCCA TCGACACTGC CTGAAGAAAG CGTCAGCAAC
TTCGGCAAGC AGGTGCCGAT GAAACGGCCG GGACAGCCGG CCGAGCTTGC CACAGCCTAT
GTGATGCTGG CCGATCCCTT GTCGAGCTAC GTCTCCGGCA CGACAATCGC TGTCACCGGC
GGCAAGCCGA TCCTTTAA
|
|---|
| Protein sequence | MPNYPTPPFP SQKQPMPGFT AQMDPVPDHG EKSYRGSERL KGKRAIITGG DSGIGRAVAI
AYAREGADLL LSYLDEDEDA DETKRLVEQA GRKAILVSGD IQDPAHCRQI VETAVKELGG
IDILVNNAAH QASFKSIDEI SDEEWELTFK VNIHSMFYLT KAAVAHMKPG SAIINTASIN
SDNPNPTLLA YATTKGAIQN FTAGLAQLLA EKGIRANAVA PGPIWTPLIP STLPEESVSN
FGKQVPMKRP GQPAELATAY VMLADPLSSY VSGTTIAVTG GKPIL
|
|---|
| |