Gene Rleg_6417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6417 
Symbol 
ID8016916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp129815 
End bp130891 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content60% 
IMG OID644828212 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002979412 
Protein GI241554199 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.26584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.308696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAACG AGGATGAGCC GAAAGTCAAA CGTCTCAAGC CGGGAGACGC TCAAAAGCTG 
ACGATGGCGG AGGTCGCCAA ATATGTCGGC GTTTCTGCCA TGACCGTTTC GCGTGCCTTT
CGCCAGGACG CGAGCGTTTC CGAGGAGACC CGAAAGCGCA TCATGGAGGC GGTCGACGCA
CTCGGTTATG TGCTCGACCT GTCTGCCGGC AGTCTTTCGT CAAGGCGAAG CGGCTTCATC
GCTGCCCTGG TGCCCTCAAT CAACAATTCG AATTTTTCCG ACACTGCGCG GGGCATGACC
GATGCACTGG AAAATACCGG CCTTCAGCTC CTCCTCGGCT ATACCGACTA TTCGTCGGAG
AAAGAGGAAG AACTGATCGA GGCTATGCTG CGCCGCCGGC CGGAAGGCAT CATCCTGACC
GGTGGCTCGC ATACGGCGCG CGCGCGGCGC ATGCTGGCAA AAGCCGGCAT TCCCGTTGTC
GAAACCTGGG AGCTTCCGGA AGATCCGATC AATCAGGTTG TCGGGTTTTC CAACAGCGAG
GCGATGGCCC TGTTGGTGCG GACGCTTGCC AGTCAGGGAT ATCGGAAGTT CGGCTATATC
GGTGGAACGA CGGCGCGCGA TACGCGCGGC AGCCAGCGGC GAAGCGGTTT CCAGAGAACA
GTCGAAGAAC TCGGCCTCGG ACCGGGACGA ATGATTTCCT TCGGCGTGCC GCCCATCACC
ATGGAGCAGG GCGGCCAGGC GATCGTCAGC CTGCTGGAAC GCTGGCCGGA CACGGAAGTG
GTTCTCTGTG TCTCCGACCT TTCCGCCTTT GGCGCCATCA TGGAATGCAC GCGCAGGGGA
ATGAAGGTTC CAAGGGACAT CGCCATTGCC GGTTTCGGCG ACTATGAGAT CTCGTCCATC
TGTCATCCGC GCATCACCAC CATCAATGTG GATTGTTATG GCATCGGCCG TCAGGCCGCC
GCCCGCCTGC TGGATACCCT CCATACCGGC GAGGCGACCG GCGATGAGAT CACGTTGACC
GGCTACAAGG TTGTCTTGCG CGAAAGCACG GACCGCAACG GCGCACCGAC AGCTTGA
 
Protein sequence
MKNEDEPKVK RLKPGDAQKL TMAEVAKYVG VSAMTVSRAF RQDASVSEET RKRIMEAVDA 
LGYVLDLSAG SLSSRRSGFI AALVPSINNS NFSDTARGMT DALENTGLQL LLGYTDYSSE
KEEELIEAML RRRPEGIILT GGSHTARARR MLAKAGIPVV ETWELPEDPI NQVVGFSNSE
AMALLVRTLA SQGYRKFGYI GGTTARDTRG SQRRSGFQRT VEELGLGPGR MISFGVPPIT
MEQGGQAIVS LLERWPDTEV VLCVSDLSAF GAIMECTRRG MKVPRDIAIA GFGDYEISSI
CHPRITTINV DCYGIGRQAA ARLLDTLHTG EATGDEITLT GYKVVLREST DRNGAPTA