| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6344 |
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| Symbol | |
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| ID | 8016958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012854 |
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| Strand | - |
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| Start bp | 57291 |
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| End bp | 58454 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644828139 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002979339 |
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| Protein GI | 241554126 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAC CAATGGGGTG GCACGTCACC GGCTATCTGA TGGCCGGCAT CCTCATCGTT
GTTCTGATCT TTCTTTCCAT CGCAAGCTAT TCCCGCATTG TCACCGCAAC CGGCATTATC
CAGCCGGACA AGGGCGTGGC GGTCGTCATG CCCTCGCGCC CGGGCGTCAT CATGAAGATG
ATGGTCGCAG ACGGCGATCA AGTCGAAGAA GGCCAGGAAC TGGTGGCCGT GCGCTCCGAG
GACTACCTGG TCAGCGGTGA ATCAGCCTCC GAAAAAGTCG CCGAAATGCT CGACCGGCAG
AATGCGAGCA TCAGCGAGCA GCTGGCGGAA GTCAAAAATG ATGAAATTGC CCAAACGGCG
CAATTTAGCG CCCAGATATC CGGCTACCAG ACGCAGATCG ACAAGCTTCA AAGCCAGATC
GCCTTGCAAA AGGAACTGAT CACCTCGATC GAGAAAGATG TCGAGCGCAT TCGCGGCCTG
GTCGACAAGG GTATCGTTCC ACGACGAGAC GTGACTTTGA GAGAAGATTC GCTCACCGAG
CGGCGCCAGC AAATGGCGGT GCTGGAAAGC ACGTTGACGG AACGGCGGTC GGATCTCTCC
GATGCCGAAC GAATGCTCGA TCAGGTCAAG GCGCGCTCAA ACGAGAAGGT CGCAGCACTC
CAGTCGCAGC GTGAGGATAT CAATCGCGGC CTCGCCACCA ATGAACAGTC CCGTGCCTAT
GTGATCAGAT CGCCGATCGG CGGTACGGTT TCTGCCCTCA CGGCCAAGAT CGGCGAGCCG
CTGAACACGC AGCAGGCGCT CATGAGCGTC GTGCCGCTGA ATGCAACATT GCATGCGCAA
CTGGACGTGC CCAACGCCGC CGTCGGTTTT GTCGAGGTCG GGCAGGAGGT ACGGCTGGCG
ATCGATACCT TCCCTTACCA GAGCTTCGGG ACGATCGCAG GTCGCGTCAA GAGCCTGTCG
AAAAGCCCGA TCAACCGTGG CAGCGGCGCG AGCACCAACC TGAACTATCT CGTGACGGTC
GACCTTGAGC GACAGAGCAT CACGGCCTTC GGAAAGCAGC AGGCGCTGTT TCCCGGCATG
ACCTTGTCCG CCCGGATTGC GACCGCGCGC CAATCTCTAC TGGAATGGCT GTTCGAGCCG
TTGTTCGCCC TTCAACGACG ATAG
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| Protein sequence | MAVPMGWHVT GYLMAGILIV VLIFLSIASY SRIVTATGII QPDKGVAVVM PSRPGVIMKM
MVADGDQVEE GQELVAVRSE DYLVSGESAS EKVAEMLDRQ NASISEQLAE VKNDEIAQTA
QFSAQISGYQ TQIDKLQSQI ALQKELITSI EKDVERIRGL VDKGIVPRRD VTLREDSLTE
RRQQMAVLES TLTERRSDLS DAERMLDQVK ARSNEKVAAL QSQREDINRG LATNEQSRAY
VIRSPIGGTV SALTAKIGEP LNTQQALMSV VPLNATLHAQ LDVPNAAVGF VEVGQEVRLA
IDTFPYQSFG TIAGRVKSLS KSPINRGSGA STNLNYLVTV DLERQSITAF GKQQALFPGM
TLSARIATAR QSLLEWLFEP LFALQRR
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