Gene Rleg_6034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6034 
Symbol 
ID8016296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp63299 
End bp64078 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content58% 
IMG OID644827342 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002978542 
Protein GI241258658 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.958438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TCGGTCCAAT CTATCTCATC GCCATCCTCA TCTTCCTCTA CACGCCCATT 
CTCGTGATGA TGGCGATGGG GTTCAACGCT TCGCCACTTT ACGAACTGCC ATTCCATTTC
TCGCTGCAGT GGTACGACGC GCTCTGGGAC AACAGCATCC TTCTGACGGC GGGCCTGAAC
AGCCTGGTGA TCGCGAGTAT CACCGCGGTT CTGGCGACGG CTTTGGGTAC CATGGCGTCC
GTTGCGCTGT CGCGCCGGAC CTTTCGCGGC AGAAGTCTCC TGCAACTGAT GCTGCTGCCG
CCGATTGCCA TTCCCTGGCT GATCACCGGC ACGGCCATGC TGATCTTCTT TTATTGGACC
GGTATCGGGC GTGGCATGCA TGCCCTGTTG ATCGGCCATG TGGCACTCGC CATCCCCTAC
GTTGTTCTGG TCGTCGGCAC GGGCTTCAAG ACAATCCGCG CCGACCTTGA AGAAGCCGCG
ATGAGCCTTG GTTCGACACC GGTTCACGCC TTCTTCTCGG TGACGCTACC GCTGCTTTAT
CCGAGCATCC TTGGCGCTGC GCTCTTCGCC TTCGCCGTGT CGCTCGACCA GTTCGTGATT
TCCTACTTCC TCGCAACGCC CGGATACACC ACCCTGCCGG TGCAGATCTA CTCCTCGATC
CGCAAGGGCT TCACCCCTGA AATCAACGCG ATCTCCACCG TGCTTCTGCT CGGCTCGATG
ACGATCATCC TGATTTTTGC GCGCTTCGCC AAGCCCGGAG ACACAAGTGA CAAACGTTAA
 
Protein sequence
MKTLGPIYLI AILIFLYTPI LVMMAMGFNA SPLYELPFHF SLQWYDALWD NSILLTAGLN 
SLVIASITAV LATALGTMAS VALSRRTFRG RSLLQLMLLP PIAIPWLITG TAMLIFFYWT
GIGRGMHALL IGHVALAIPY VVLVVGTGFK TIRADLEEAA MSLGSTPVHA FFSVTLPLLY
PSILGAALFA FAVSLDQFVI SYFLATPGYT TLPVQIYSSI RKGFTPEINA ISTVLLLGSM
TIILIFARFA KPGDTSDKR