Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6034 |
Symbol | |
ID | 8016296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012852 |
Strand | - |
Start bp | 63299 |
End bp | 64078 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644827342 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002978542 |
Protein GI | 241258658 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.958438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACGC TCGGTCCAAT CTATCTCATC GCCATCCTCA TCTTCCTCTA CACGCCCATT CTCGTGATGA TGGCGATGGG GTTCAACGCT TCGCCACTTT ACGAACTGCC ATTCCATTTC TCGCTGCAGT GGTACGACGC GCTCTGGGAC AACAGCATCC TTCTGACGGC GGGCCTGAAC AGCCTGGTGA TCGCGAGTAT CACCGCGGTT CTGGCGACGG CTTTGGGTAC CATGGCGTCC GTTGCGCTGT CGCGCCGGAC CTTTCGCGGC AGAAGTCTCC TGCAACTGAT GCTGCTGCCG CCGATTGCCA TTCCCTGGCT GATCACCGGC ACGGCCATGC TGATCTTCTT TTATTGGACC GGTATCGGGC GTGGCATGCA TGCCCTGTTG ATCGGCCATG TGGCACTCGC CATCCCCTAC GTTGTTCTGG TCGTCGGCAC GGGCTTCAAG ACAATCCGCG CCGACCTTGA AGAAGCCGCG ATGAGCCTTG GTTCGACACC GGTTCACGCC TTCTTCTCGG TGACGCTACC GCTGCTTTAT CCGAGCATCC TTGGCGCTGC GCTCTTCGCC TTCGCCGTGT CGCTCGACCA GTTCGTGATT TCCTACTTCC TCGCAACGCC CGGATACACC ACCCTGCCGG TGCAGATCTA CTCCTCGATC CGCAAGGGCT TCACCCCTGA AATCAACGCG ATCTCCACCG TGCTTCTGCT CGGCTCGATG ACGATCATCC TGATTTTTGC GCGCTTCGCC AAGCCCGGAG ACACAAGTGA CAAACGTTAA
|
Protein sequence | MKTLGPIYLI AILIFLYTPI LVMMAMGFNA SPLYELPFHF SLQWYDALWD NSILLTAGLN SLVIASITAV LATALGTMAS VALSRRTFRG RSLLQLMLLP PIAIPWLITG TAMLIFFYWT GIGRGMHALL IGHVALAIPY VVLVVGTGFK TIRADLEEAA MSLGSTPVHA FFSVTLPLLY PSILGAALFA FAVSLDQFVI SYFLATPGYT TLPVQIYSSI RKGFTPEINA ISTVLLLGSM TIILIFARFA KPGDTSDKR
|
| |