Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5971 |
Symbol | |
ID | 8016391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | + |
Start bp | 514745 |
End bp | 516088 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828083 |
Product | Chloride channel core |
Protein accession | YP_002979283 |
Protein GI | 241518655 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.306058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.236498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATTC CCTATCGCTA TTCAAAGGTT CTTCGCCGCT CCCGTGTTCT CTGGGGTTCC TTTTCCCTAT GGCGGCCGAG ACTGGTCTTC TGGTGCGGAG CATTGACAAT CGGCGTGATC AGCGTTGGGT TTGCGAAGCT TGCGGATCTG GCGCAGAAGG GCTTCGGGTC TCTCACCTCC TCCGGTGAAT GGGCCTTTCT GCTGCCCCTG GCGCTGACGC CGGCCGGATT TATGCTGTCG GCCTATCTGG CGGCGACGCT GTTTCCAAAT TCTGGTGGTA GCGGTATCCC GCAGGCGATC GCCGCCAGAC ATTTAAGACA CGACGAAGAC CGGACGCCGC TGCTGTCGCC GAAGATCGCC TTTGGCAAGA TCGTGCTGAC GGTGCTCGGA CTGTTTTCCG GTGCTTCGAT CGGGCGCGAG GGACCGACTG TCCAGGTCGG CGCATCGATC ATGCTCGCCG TCGCTAGGTT CAGTGGCATG GCGCAGGCGC GCGGGCTGAT CCTTGCCGGT TCTGCGGCGG GAATTGCGGC CGCATTCAAC ACGCCGCTTG CCGGTATCGT CTTCGCGATC GAGGAAATGA GCCGGACCTA CGAGTCTCGG GCGAACGGTC TGGTGCTGAC CGCCGTCATT CTCTCCGGTC TCGCGGCACT CGGCCTTTCG GGCAGCTACA ACTATTTTGG CATGGCCTCG GCGGCTCCGA CGGAGTTTCG CGACTGGGGA CTGGTTCTGA TCTGCGGCAT CGGCGGCGGC GCTCTTGGGG CGGCCTTTAG CGGCTTTGCG CTGCATTTTG GTCAGCGCAT CCGCCGCTGG GCACAACCGC AGCCACTGAA GCGCATGCTG GCGCTAGCCG GTGTTTGCGG GTTGGCGATC GCAGTGATCG GCGTCGCAGC CGGCGGTACG ACGTTCGGCA CCGGCTACGA GCAGGCGAGA AGCGCAATCG AAGGCAACGC CCTTCCGCTG CTCTTCTTCC TCGAAAAACT TGCCGCCAGC TTCCTGTCGA TGATCTCAGG CATTCCGGGC GGCATCTTTG CGCCATCGCT TGCGGTCGGC GCCGGTTTCG GCAGCACGGT CGGATCGCTG CTCGGCACTA GCATCGCGTT GGCGGCCATC CTCGGGATGG CAGGCTATTT CGCGGGCGTC GTGCAGGCGC CGATGACCGC CTTCGTCATC ATCCTTGAAA TGACCGGCGA CCACCAGGCG GTTATCCCGA TCATGGCGGT TTCGATGATC GGCTACGTGA CATCGCGGAT CCTGTCGCGC GAACCGCTTT ATCACGGTCT CTCGCGCGTC TTCATCGCAG CGGCTATCCG AGCGCGGCGT GCTGTCGAAA GGGAATCCCA GTAG
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Protein sequence | MPIPYRYSKV LRRSRVLWGS FSLWRPRLVF WCGALTIGVI SVGFAKLADL AQKGFGSLTS SGEWAFLLPL ALTPAGFMLS AYLAATLFPN SGGSGIPQAI AARHLRHDED RTPLLSPKIA FGKIVLTVLG LFSGASIGRE GPTVQVGASI MLAVARFSGM AQARGLILAG SAAGIAAAFN TPLAGIVFAI EEMSRTYESR ANGLVLTAVI LSGLAALGLS GSYNYFGMAS AAPTEFRDWG LVLICGIGGG ALGAAFSGFA LHFGQRIRRW AQPQPLKRML ALAGVCGLAI AVIGVAAGGT TFGTGYEQAR SAIEGNALPL LFFLEKLAAS FLSMISGIPG GIFAPSLAVG AGFGSTVGSL LGTSIALAAI LGMAGYFAGV VQAPMTAFVI ILEMTGDHQA VIPIMAVSMI GYVTSRILSR EPLYHGLSRV FIAAAIRARR AVERESQ
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