Gene Rleg_5971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5971 
Symbol 
ID8016391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012853 
Strand
Start bp514745 
End bp516088 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content63% 
IMG OID644828083 
ProductChloride channel core 
Protein accessionYP_002979283 
Protein GI241518655 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.306058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.236498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTC CCTATCGCTA TTCAAAGGTT CTTCGCCGCT CCCGTGTTCT CTGGGGTTCC 
TTTTCCCTAT GGCGGCCGAG ACTGGTCTTC TGGTGCGGAG CATTGACAAT CGGCGTGATC
AGCGTTGGGT TTGCGAAGCT TGCGGATCTG GCGCAGAAGG GCTTCGGGTC TCTCACCTCC
TCCGGTGAAT GGGCCTTTCT GCTGCCCCTG GCGCTGACGC CGGCCGGATT TATGCTGTCG
GCCTATCTGG CGGCGACGCT GTTTCCAAAT TCTGGTGGTA GCGGTATCCC GCAGGCGATC
GCCGCCAGAC ATTTAAGACA CGACGAAGAC CGGACGCCGC TGCTGTCGCC GAAGATCGCC
TTTGGCAAGA TCGTGCTGAC GGTGCTCGGA CTGTTTTCCG GTGCTTCGAT CGGGCGCGAG
GGACCGACTG TCCAGGTCGG CGCATCGATC ATGCTCGCCG TCGCTAGGTT CAGTGGCATG
GCGCAGGCGC GCGGGCTGAT CCTTGCCGGT TCTGCGGCGG GAATTGCGGC CGCATTCAAC
ACGCCGCTTG CCGGTATCGT CTTCGCGATC GAGGAAATGA GCCGGACCTA CGAGTCTCGG
GCGAACGGTC TGGTGCTGAC CGCCGTCATT CTCTCCGGTC TCGCGGCACT CGGCCTTTCG
GGCAGCTACA ACTATTTTGG CATGGCCTCG GCGGCTCCGA CGGAGTTTCG CGACTGGGGA
CTGGTTCTGA TCTGCGGCAT CGGCGGCGGC GCTCTTGGGG CGGCCTTTAG CGGCTTTGCG
CTGCATTTTG GTCAGCGCAT CCGCCGCTGG GCACAACCGC AGCCACTGAA GCGCATGCTG
GCGCTAGCCG GTGTTTGCGG GTTGGCGATC GCAGTGATCG GCGTCGCAGC CGGCGGTACG
ACGTTCGGCA CCGGCTACGA GCAGGCGAGA AGCGCAATCG AAGGCAACGC CCTTCCGCTG
CTCTTCTTCC TCGAAAAACT TGCCGCCAGC TTCCTGTCGA TGATCTCAGG CATTCCGGGC
GGCATCTTTG CGCCATCGCT TGCGGTCGGC GCCGGTTTCG GCAGCACGGT CGGATCGCTG
CTCGGCACTA GCATCGCGTT GGCGGCCATC CTCGGGATGG CAGGCTATTT CGCGGGCGTC
GTGCAGGCGC CGATGACCGC CTTCGTCATC ATCCTTGAAA TGACCGGCGA CCACCAGGCG
GTTATCCCGA TCATGGCGGT TTCGATGATC GGCTACGTGA CATCGCGGAT CCTGTCGCGC
GAACCGCTTT ATCACGGTCT CTCGCGCGTC TTCATCGCAG CGGCTATCCG AGCGCGGCGT
GCTGTCGAAA GGGAATCCCA GTAG
 
Protein sequence
MPIPYRYSKV LRRSRVLWGS FSLWRPRLVF WCGALTIGVI SVGFAKLADL AQKGFGSLTS 
SGEWAFLLPL ALTPAGFMLS AYLAATLFPN SGGSGIPQAI AARHLRHDED RTPLLSPKIA
FGKIVLTVLG LFSGASIGRE GPTVQVGASI MLAVARFSGM AQARGLILAG SAAGIAAAFN
TPLAGIVFAI EEMSRTYESR ANGLVLTAVI LSGLAALGLS GSYNYFGMAS AAPTEFRDWG
LVLICGIGGG ALGAAFSGFA LHFGQRIRRW AQPQPLKRML ALAGVCGLAI AVIGVAAGGT
TFGTGYEQAR SAIEGNALPL LFFLEKLAAS FLSMISGIPG GIFAPSLAVG AGFGSTVGSL
LGTSIALAAI LGMAGYFAGV VQAPMTAFVI ILEMTGDHQA VIPIMAVSMI GYVTSRILSR
EPLYHGLSRV FIAAAIRARR AVERESQ