Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_5501 |
Symbol | |
ID | 8016810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012853 |
Strand | - |
Start bp | 87552 |
End bp | 88616 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644827668 |
Product | ornithine cyclodeaminase/mu-crystallin |
Protein accession | YP_002978868 |
Protein GI | 241518240 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.205355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.57704 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGACA ATGCCACGGA CTGCAATGTC CGCTTTCTGA CCCGCCAGGA CCTGCAGTCG GCCGGCGCGG AACTCACGAT CGCGGAAATC CATGCAGCCA CGGATGCCGC CTGGGCGGAT ATCAAAAGCG GGAGGACTGT CGGAGGAAAG GCCGTCCTCT CGCTTCCAGA GGAGGAGTTC TGGCAGCGGC AGAGCGTCGC CCCGTTCAGG CGTGACTTCG TCGACGAGCG CCTCGGCTGG AAATTGTCGG CTCTCTATTG CGTCAATCCG ACCCATGGCG GCGTCAAGAT CATCGGCGCA AACGCCTTCA ATCGGCATCT TGGCCTGCCT CGCTCGACGT CGACCTTCGT CCTTTTGGAA AAACGGACGC TTCGGCCCTT GGCGATACTC GACGGGACGG GGATTTCCGC TCTGAGAACC GGCACCTATG CGTCGAAAGT GGCTGAGCTG TTTGTTCGCT GCCGGGTACC TGTGTCGGGC TTCATTTTCG GATCGGGACC CGTCGCCCGA AGTGTGGTCG AGTGCCTTGA TTTCGCCTGT TCCGACCTGA TCGGAGACAT CTTCATCCGC AGCCGATCGA TTGAAGGCGT GGAAAGACTG CTGTCGGACT TCGCTGACCG GACGTCGTTT CGGCTTCATG CCGTAACCGA CAACCAAAGA CTGAAGGAAT GCGCCCTGCT GATCACCGCC ACGAATGCCC GCCAGCCGCT GTTTGAGGAC GAGGAGTTAA ACAGGGGGGC TGTGACGCTT CATCTTGGCG GAGACGAAGT GCCCGAAGCC TATCTGCAGC GAGCCTTGAA AAGCGGGACC GTCGTCTGTG ACGACATCAA GACGGTCTCG CGCAGGAACT CGCAAAGCAT TGCCCTCCAC TTCTCCCGAA AAGGGCTTTC TCTGGAGGAG ATCGGTCCGT TGCTTGGCGT GAGGGAGCTC TCCGCGCCGA ACGACTGGGT CCGGGAGGCG GACACGCCGG TTTGCGTAAC CTGCGTCGGC CTGCCGATGC TCGACCTTTA TGCCGTGCAA GCGACCTATG AAAAATATCT CGCTCGCACG CAGGAAAACA CCTGA
|
Protein sequence | MFDNATDCNV RFLTRQDLQS AGAELTIAEI HAATDAAWAD IKSGRTVGGK AVLSLPEEEF WQRQSVAPFR RDFVDERLGW KLSALYCVNP THGGVKIIGA NAFNRHLGLP RSTSTFVLLE KRTLRPLAIL DGTGISALRT GTYASKVAEL FVRCRVPVSG FIFGSGPVAR SVVECLDFAC SDLIGDIFIR SRSIEGVERL LSDFADRTSF RLHAVTDNQR LKECALLITA TNARQPLFED EELNRGAVTL HLGGDEVPEA YLQRALKSGT VVCDDIKTVS RRNSQSIALH FSRKGLSLEE IGPLLGVREL SAPNDWVREA DTPVCVTCVG LPMLDLYAVQ ATYEKYLART QENT
|
| |