Gene Rleg_5406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_5406 
Symbol 
ID8007364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp823080 
End bp823859 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID644822310 
ProductABC transporter related 
Protein accessionYP_002973570 
Protein GI241113735 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGGTG CCGAAATTGC AAAGCCCCTC GTCAGAGCCC GCAACGTCCA CAAGTCCTTC 
GACCAGCTCG AAGTGCTGAA GGGGATCGAC CTCGACGTCA TGCCGGGTGA AGTCGTCGTC
GTGCTCGGCC CGTCCGGGTC GGGAAAATCG ACCTTCCTGC GCTGCATCAA CCATCTCGAA
GCGATCAATA AGGGGTTTAT CGAAGTCGAT GGCGAGCAGA TCGGCTACCG TCTCCGCAAG
GACCGGCTGG AAAAGCTGTC GAGCAACGGG ATCGCCAGCC AGCGGCGCAA GATTGGCATG
GTGTTCCAGC AATTCAATCT CTATCCGCAT ATGACGGTGC TGCAGAACAT CGTCGAGGCC
CCGATCGGCG TGCACGGAGA AAGTCGTAAG GCCGCGACCG AGAACGCCAT GCGGCTTTTG
GAGCGGGTCG GCCTATCGGA AAAGGCGGGT AGCTATCCCC GCCAGCTCTC CGGCGGCCAG
CAGCAGCGCG TCGCCATCGC CCGCGCCCTG GCGAACAAGC CGAAGCTGAT GCTGTTCGAT
GAGCCTACTT CGGCGCTCGA CCCAGAACTC GTCGGCGAAG TGCTGGCCAC CATGCGCGAT
CTCGCCAAAC AGGGCCTGAC GATGATCGTC GTGACCCACG AGATCGGTTT CGCCCGTGAG
GCGGCCGATC GGGTGGTGTT CATGGACGGC GGCAATGTCG TCGAAATGGG CAAGCCCGAG
GATGTCATCG GCAATCCACA ACATCCCCGG ACCCAGGCTT TTCTCGCCCG TTTTCTCTGA
 
Protein sequence
MTGAEIAKPL VRARNVHKSF DQLEVLKGID LDVMPGEVVV VLGPSGSGKS TFLRCINHLE 
AINKGFIEVD GEQIGYRLRK DRLEKLSSNG IASQRRKIGM VFQQFNLYPH MTVLQNIVEA
PIGVHGESRK AATENAMRLL ERVGLSEKAG SYPRQLSGGQ QQRVAIARAL ANKPKLMLFD
EPTSALDPEL VGEVLATMRD LAKQGLTMIV VTHEIGFARE AADRVVFMDG GNVVEMGKPE
DVIGNPQHPR TQAFLARFL