Gene Rleg_4716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4716 
Symbol 
ID8007191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp85828 
End bp87126 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content59% 
IMG OID644821649 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002972909 
Protein GI241113074 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCG CCACCGTCAG CGCATTTGCG CTGAGCACCA TGTTATTTTC AGCATCTACG 
TCATTTGCCC AGGAACTTGC CACGAAGGAC AGGATCGGCC TTGCCGATGC GCCCAAATCC
CTCGTCGTCC GCTTGACGAA CGACAGTCCC AACAATTCGG ATCCGGCGAT CGCCGAGGGC
TATCAGAAGC TCTTCGTCGA TTTCATCAAG AAGCATCCGG ACTGGAAATT GCAGATGCAA
TTCATGTCCT CGGACATCGG CACCGAACAG GCCAAGATGC TGGAGCAGGC CAAGGCCGGC
AACGCGCCTG ACTGCGCCGC TGTCGACTCC TTCGTCCTCT CGCAGTTCAT GGTCAATAAA
GTTCTTGCGG ACTTCACGCC GTATTTTTCG AAGGAGGAAG TGGATGACCT GTTCCCCTTC
ATCCGCAGCG GCATCACCGA TAAGGACCAG ACGGTCCGCG CTTGGTGGTG GGATACCGAT
CTTCGTGTGC TCTACCGCAA CAAGTCGATC GTTGCGGACG CGCCGCAGAC ATGGGACGAC
CTGAAAAAGG CCGCGCTCGC CTCCACCAAG GAGGGCATGG AAGGTGTCCT CTTCAATGGC
GGGCGCTGGG AAGGCACGAC GTTCGACTGG CTCGCGAATT ATTGGGCGCT GGGCGGCAAG
CTTGTCGACG ATTCAGGCAA GCCGGTATTC GGCGAAGGCG AGAACAAGGA GAAATTCCTG
AAGGCCCTGA ATTATTTCAA GGATCTCGTC GATTCGGGTG CCGCGCCCAA GCGCGTCAGC
ACGATCGCGA ATTATGACGA TTTGAATGCT GCGGCCGCCG CGGCGACGAC GGCTCTCTTC
ATCGGCGGCA ACTGGCAATA TGCGCAGTTG AAGGCCACGC TCGACGAGGA CGAGTTCAAC
AACTGGACAT TCTCGCCGAT CCCCGGCCCC AGCGCCGATC AGCGTTCGAC CGGCACCGGC
GGTTGGACGA TCGCCTCCTT CAGTAAGGAC AAGGATAAGG TCGAGATGTG CGCCAACCTC
GCCCGCGAGG TTTATATGGG GCCGGCAAAC GCGCTGCAGC AGCAGTTGCC GACCAGGAAG
TCGCTGTTCG ACAAATATGA GGTCTTCTCT ACCGAAGCCA ACAAGACCTT CGCCAAGGCT
CTGGTCGACG GACAGGCACG CCCGGGTGTG CCGATCTATC CCGAAATCTC CAACCAGATC
CAGATCATGA TGGGCGACGT GCTCTCGGGG ACCAAAAAGC CGGAAGACGC GTTGAATGCC
GCCTTCAACG CGGCGCTGGA GGCCTACAAG CGTCTCTAG
 
Protein sequence
MKSATVSAFA LSTMLFSAST SFAQELATKD RIGLADAPKS LVVRLTNDSP NNSDPAIAEG 
YQKLFVDFIK KHPDWKLQMQ FMSSDIGTEQ AKMLEQAKAG NAPDCAAVDS FVLSQFMVNK
VLADFTPYFS KEEVDDLFPF IRSGITDKDQ TVRAWWWDTD LRVLYRNKSI VADAPQTWDD
LKKAALASTK EGMEGVLFNG GRWEGTTFDW LANYWALGGK LVDDSGKPVF GEGENKEKFL
KALNYFKDLV DSGAAPKRVS TIANYDDLNA AAAAATTALF IGGNWQYAQL KATLDEDEFN
NWTFSPIPGP SADQRSTGTG GWTIASFSKD KDKVEMCANL AREVYMGPAN ALQQQLPTRK
SLFDKYEVFS TEANKTFAKA LVDGQARPGV PIYPEISNQI QIMMGDVLSG TKKPEDALNA
AFNAALEAYK RL