Gene Rleg_4145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4145 
Symbol 
ID8014938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4230334 
End bp4230738 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content65% 
IMG OID644826715 
ProductRNA-binding S4 domain protein 
Protein accessionYP_002977925 
Protein GI241206829 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00358157 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0781043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGG AGACACAGCC GACCAGCGGT TCGCGCCAGC GCATCGACAA GTGGCTGTTC 
TTCGCGCGCA TGGCGAAGTC ACGCTCGGTG GCGCAGAGCC ATATCCAATC AGGCCATGTG
CGCATCAACG GCGAGCGCTG CAGCCAGCCG AGCCAGATGG TCAAGCCGGG TGACCGTATC
GAGCTGACGC TGGAGCGGCG CGATGTCGTT CTCGTCGTGC GCCTTGCCGG CGAGCGGCGG
GGGCCTTACG AGCAGGCGCG CCTGCTTTAC GACGACCAAT CCCCGCCGCC CGATGAGGCA
AAACGTCTCA CGCCCTACGA GCAGGCAATC CGGGCGACCG GCACCGGCCG TCCGACCAAA
AAGGAAAGAC GTGCAATCGA CAGGCTGATG TCGGACGAGG ATTAG
 
Protein sequence
MSGETQPTSG SRQRIDKWLF FARMAKSRSV AQSHIQSGHV RINGERCSQP SQMVKPGDRI 
ELTLERRDVV LVVRLAGERR GPYEQARLLY DDQSPPPDEA KRLTPYEQAI RATGTGRPTK
KERRAIDRLM SDED