Gene Rleg_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3877 
Symbol 
ID8014700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3946930 
End bp3947820 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content64% 
IMG OID644826447 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002977659 
Protein GI241206563 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0848809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTTC GCGCGACGTT GATCGGCTTT ACGGCCATTC TGATGTGGTC GTTCCTGGCG 
TTGTTCACGG CCGCCTCCGG CAAGATGCCA CCGTTCCAGC TTTCGGCCGT CTGCTTTGCG
ATCGGCAGCA TTCCCGGCCT CGTCGTGCTT ATCCTCAATC CCGCGCGGCT GGCGCTGCTG
AAGCAGCCGG CCAAGGTCTG GATAACCGGC ATTGCGGGGC TGTTCGGTTA TCACTTCCTC
TATTTTACCG CGCTCCGGAA CGCGCCGGCG GTGGAGGCGG GGCTGGTCGC CTATCTCTGG
CCGCTGTTGA TCGTCGTCGG TTCGGCGCTG CTGCCGGGCG AACGGTTGCA CTGGTATCAT
GCGGCGGGTG CGCTTGCCGG ACTTTGCGGT ACCTTCCTGA TCGTCGGTCG CAACGGCATC
GATTTCGACG GCGCCTATGC CGTCGGTTAC GGTGCCGCCT TTCTCTGCGC CTTCACATGG
TCCGGCTATT CGCTGCTGAC GCGGCGTTTC GACGCCGTCT CCACGGATGT CGTCACCGGC
TTCTGCCTTG CGACATCCAT GCTGTCGTTG CTCTGCCATC TCGGCCTGGA GACGACCGTC
TGGTCGGCAA CGAGTTTCGA GTGGGTCGCC GTCGCCGGGC TTGGGCTCTT TCCGGTCGGG
GCTGCCTTCT ACGCGTGGGA TTACGGCGTC AAGAACGGCG ATATCCAGAT TCTCGGCGCG
GCAAGTTACG CCGCACCTCT GCTTTCGACG CTTATTCTGC TGCTGTTTGG ATTTGCCGAG
CCGAGCTGGC GCATTGCTCT CGCCTGCGTG CTCGTCACCG GCGGGGCGGT GCTCGCCGCC
CAGGACATGT TCCGCCGCAA GAGCCAGGCG CAGCCCGCAG CAGCAGAATA G
 
Protein sequence
MKLRATLIGF TAILMWSFLA LFTAASGKMP PFQLSAVCFA IGSIPGLVVL ILNPARLALL 
KQPAKVWITG IAGLFGYHFL YFTALRNAPA VEAGLVAYLW PLLIVVGSAL LPGERLHWYH
AAGALAGLCG TFLIVGRNGI DFDGAYAVGY GAAFLCAFTW SGYSLLTRRF DAVSTDVVTG
FCLATSMLSL LCHLGLETTV WSATSFEWVA VAGLGLFPVG AAFYAWDYGV KNGDIQILGA
ASYAAPLLST LILLLFGFAE PSWRIALACV LVTGGAVLAA QDMFRRKSQA QPAAAE