Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3834 |
Symbol | |
ID | 8014661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3908168 |
End bp | 3909799 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644826403 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002977616 |
Protein GI | 241206520 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.077636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCTGC CGTCCCACGA TCGCTATGAC GATCTCTATT GCAATTTCTC CTGGCAGATC ACGGAGGATT TCAATATCGG CCGCGCCGTC AGCGACGACT GGGCCGCGAG AGAACCCGAG CGCGTCTGCC TCGAGCATTT CAGCCCCGAC GGCAATCATC GCGCGATGAC CTATCGCGCG CTCGCCGACC GTTCCTCGGC CTTTGCAAAT GCGCTCGTTT CACTTGATAT CAAACGCGGC GATCGCGTCG CGCTGCTCTT GCCGCAATCC TTCGAAACGG TGATCGCGCA TGTGGCGATA TACAAGACCG GCGCGATCGC GCTGCCACTG GCGCTGCTTT TCGGCGTCGA GGCGCTGGAA TACCGGCTGA AGGCGGCAGG TGCTGTGGCC GTCGTCACCA ATGGTTTCGG TCTCGAACGC ATCCGGCAGA TCCGCGGACG CCTGCCGGCG CTGAAGCATA TCGTCAGCAT CGACGGGGCG AGTGGCGATG CGACTGCTTT CGCCGAACTG GTGGATGGCT ATCCCCCTGT CTTCGACATC GCCAAAACCG GTCCGGACGA TCCGGCGCTG ATGATCTTCA CTTCGGGAAC GACGGGGCCG CCCAAGGGCG CGTTGCACGG CCACCGCGTC CTGCCCGGCC ATATTCCGGG CATGCAGTTC GCCCATGAGG GGTTTCCGCG GCCGGGTGAT AAGGTCTGGA CGCCGTCCGA CTGGGCCTGG GCCGGCGGGC TGCTCAACGC GCTGCTGCCG AGCCTTCTGC TCGGGATTCC TGTCGTCTCT TCGCCGGCGC AGAAATTCGA TGCCGACATG GCCTATCGCA TCATGGCCGA GATGAAGGTG CGCAATGCCT TCATTCCGCC GACGGCGCTA AGGCTGATGA GATCCGTTGC CGATCCGCGC TCGAAATATG ATCTGGCGCT GCGCACCATC GGCTCGGCCG GGGAGGCGCT CGGCCGCGAG ACCTATGAAT GGGCGCGGCA TGTGCTCGGC ATCACCGTCA ACGAATTCTA CGGCCAGACG GAGTGCAATT TCGTGCTTGC GTCGAGCGCT GCCTATGGCG TCACCAAAGC GGGCGCCATC GGACGGGCAG TGCCCGGGCA CCGCGTCGCG ATCGTCAGCG AGACGGGCGA CGAGTTGCCC GTCGGCGAAC CGGGCCAGAT TGCCATCGCC AGTCCCGATC CTGTCATGTT CCTCGGCTAC TGGGACGATA CGGCAGCGAC GGAACGAAAA TTCGTCAAAG GCTGGCTGCT CACCGGCGAT ATCGGCCGGC AGGACGCCGA GGGATATGTG ACCTTCGAAG GCCGCGACGA CGACGTCATC ACCTCGTCGG GATATCGCAT CGGCCCGGCC GAGATCGAGG ACTGCCTGAT CGGTCATCCC GCCGTGCAGC TTGCCGCCGC CGTCGGCAAA CCCGATGCCG TGCGCACCGA GATCGTCAAG GCCTATATCG TGCTTTCACC AGGCCATCGG CCAAGCGAGA CGCTGGCCAC CGACATCAGG GAATGGGTGA AGACGCGGCT TTCGATGCAC GAATATCCGC GCGAAGTGGA ATTCATCGAT GCATTGCCGC TGACCACCAC CGGGAAGGTC ATCCGACGGC TGCTACGCGA AAGGGCCGCT GGCGAGGGAT AG
|
Protein sequence | MQLPSHDRYD DLYCNFSWQI TEDFNIGRAV SDDWAAREPE RVCLEHFSPD GNHRAMTYRA LADRSSAFAN ALVSLDIKRG DRVALLLPQS FETVIAHVAI YKTGAIALPL ALLFGVEALE YRLKAAGAVA VVTNGFGLER IRQIRGRLPA LKHIVSIDGA SGDATAFAEL VDGYPPVFDI AKTGPDDPAL MIFTSGTTGP PKGALHGHRV LPGHIPGMQF AHEGFPRPGD KVWTPSDWAW AGGLLNALLP SLLLGIPVVS SPAQKFDADM AYRIMAEMKV RNAFIPPTAL RLMRSVADPR SKYDLALRTI GSAGEALGRE TYEWARHVLG ITVNEFYGQT ECNFVLASSA AYGVTKAGAI GRAVPGHRVA IVSETGDELP VGEPGQIAIA SPDPVMFLGY WDDTAATERK FVKGWLLTGD IGRQDAEGYV TFEGRDDDVI TSSGYRIGPA EIEDCLIGHP AVQLAAAVGK PDAVRTEIVK AYIVLSPGHR PSETLATDIR EWVKTRLSMH EYPREVEFID ALPLTTTGKV IRRLLRERAA GEG
|
| |