Gene Rleg_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3382 
Symbol 
ID8014260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3397961 
End bp3398785 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID644825941 
ProductABC transporter related 
Protein accessionYP_002977168 
Protein GI241206072 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.235988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC CGCTTCTTTC CGTCGAGGAT CTGACAATTT CCTTTCCCTC CGAGGCCGGC 
CTTCTCCGCG TCGTCGACGG CATCTCCTTT GCCATCGGCC GCGAGGTGGT GGCGCTCGTC
GGCGAATCCG GTTCCGGCAA GTCGATGACC GGCCGCGCGA TCATGGGCCT GCTGCCGCGC
CAGGCGGATA TCCGGGCAAG GCGGCTGGAG TTCGACGGGC AGGATCTCAC AGCACTTTCG
CCCTCCGGCT GGAACAGGCT GCGCGGCGCC GGCATCGGCC TCATCCTGCA GGATCCGAAA
TATTCGTTGA ATCCGGCGCA TCGGATCGGC CGGCAGGTCG AGGAGGCATT GCTGCTGCAT
GCCCGGCTCT CGGTTGGCGA GCGGCGCGAC CGCGCTCTCG ACATGCTTGA CAAGGTCGGA
CTGCCCGATC CGAAGCGGGT CTATTCGAGT TATCCCGCAG CGCTTTCCGG CGGCATGGGG
CAGCGTGCGA TGATCGCCGC CATGCTGATC AACCGCCCGA AGCTTTTGAT CGCCGACGAA
CCGACTTCGG CGCTCGATCG CGGGCTGCAG GACCAGATCC TGACGTTGCT GCGCTCGCTG
ACGGAAGAGC TCGGCATGGG GCTGCTGCTG ATCAGCCACG ATCTGCAGCA GGTTTCGCGT
TATGCCGACC GGGTGATGGT GATGCGGCGG GGCAGGATCG AGGAGGAGAT GGCATCCGCC
GATCTCGCCA ATGCGAAATC GGCCTATACC AGGGCGCTCT GGGCAGCACG GCCTTCGGCC
GCCACCTACG GCACGCATCT GCCAGTCTAT GGAGAAGAGC CATGA
 
Protein sequence
MTEPLLSVED LTISFPSEAG LLRVVDGISF AIGREVVALV GESGSGKSMT GRAIMGLLPR 
QADIRARRLE FDGQDLTALS PSGWNRLRGA GIGLILQDPK YSLNPAHRIG RQVEEALLLH
ARLSVGERRD RALDMLDKVG LPDPKRVYSS YPAALSGGMG QRAMIAAMLI NRPKLLIADE
PTSALDRGLQ DQILTLLRSL TEELGMGLLL ISHDLQQVSR YADRVMVMRR GRIEEEMASA
DLANAKSAYT RALWAARPSA ATYGTHLPVY GEEP