Gene Rleg_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3381 
Symbol 
ID8014259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3397224 
End bp3397964 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID644825940 
ProductABC transporter related 
Protein accessionYP_002977167 
Protein GI241206071 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.52884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.234483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC TTTCCCTGGA CAATCTTTCC GTCACTTTCC ATGGCCATGG CCAGGGCGGC 
GGCAAAGGCT TCACCGCCGT TCGCGATGTG AGCTTCACAG TTGCATCAGG CGAGACCTTC
GGGCTGATCG GCCCTTCCGG CTGCGGCAAG ACGACGGTGT TGCGCGCCGT TGCCGGATTG
AATATCGGCT GGCAGGGTGC CATCAGCGTG TTCGGCGAGC CGCTGCATCC GGGCCGGAAG
ATTACCGGCG CGCTGCGCGG CAATATCCAG ATGGTGTTCC AGGATCCCTA TTCCTCGCTG
CATCCGCGCC ATCGCATCTC GCGTATCCTG GGCGAGCCGT TGTCGCTGCG CGGCATTGCC
GGCGTCGAGG AGGCGGTGCG TATCGCGCTC GATCAGGTCG GCCTCTCGGC TGCGATCGCC
GGCCGCTACC CGCATCAGCT TTCCGGCGGC CAGCGCCAGC GTGTTGCCAT CGCGCGGGCG
CTGCTGCTGA AGCCGAAGCT GTTGTTGCTC GACGAGCCGA CTTCGGCGCT GGACGTCTCG
GTGCAGGCGG AAATTCTCAA TCTGCTCAAC GATCTGAAGG CTGCACATGG CATGACCTTC
GTGCTGGTCA GCCACGACCC CGGCGTCGTC GCCCATATGT GCGACCGTGC CGTCACCATG
CAGGCGGGCG GCATCGAAAG CCTGCTCGAC CGCGCCGCGC TGTCTGGAAA CGGCTGGGTC
GAGCAGTCAA GCCTTCGCTG A
 
Protein sequence
MTALSLDNLS VTFHGHGQGG GKGFTAVRDV SFTVASGETF GLIGPSGCGK TTVLRAVAGL 
NIGWQGAISV FGEPLHPGRK ITGALRGNIQ MVFQDPYSSL HPRHRISRIL GEPLSLRGIA
GVEEAVRIAL DQVGLSAAIA GRYPHQLSGG QRQRVAIARA LLLKPKLLLL DEPTSALDVS
VQAEILNLLN DLKAAHGMTF VLVSHDPGVV AHMCDRAVTM QAGGIESLLD RAALSGNGWV
EQSSLR