Gene Rleg_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2097 
Symbol 
ID8013121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2087274 
End bp2088320 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content63% 
IMG OID644824683 
Productglycoside hydrolase family 25 
Protein accessionYP_002975913 
Protein GI241204817 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.319373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.427488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACAT CGGCAGTGCC AGCAATCCTC CTCGCCGCCC TGATCCTGTC GGGATGCGCC 
GCCAGTTCTG GCGCCGAAGA TGTGCTGGGC AACGTGCCGT CGTCGGAAAC GACCAATGCC
ATCGCCCAGC CAAGCGGCCC GATTCCTGCC GCTGCCGTGG GCGATCCTGC GCCGCAGGCA
AGCCCGCCGC AGCAAGCGTT GCGCTGGGCG GGAGAGGTTC CGGAGCCGCA GGCGCTCGTG
CCCGCCGACA GGCCGGTTGG CATGCCGCTG CCGACAGATA AACCGGTCGC GCTGCTGATG
CCGGCCAATC CCGCCGGCAA TGCAATGCCC GATGTCGGCA CGAGATCGCC GACACGCGGC
CAAATTTACG GCCACCGCTT CCGCGATGCC AAGCCGATCA ACTTCGGCTC CACCTCGCCG
AGAAAGCTTG CCGTGCATGG CGTCGATGTC TCGCGTTGGC AGGGCGAGAT CGACTGGGAA
ACGTTGCGGA GGCAAGGCGC CAATTTCGTC TACATCAAAG CCACGGACGG CGGCGATCAC
CTTGATCCGA TGTTCAAGAA AAACTGGCGC CGCGCCAAGG AAGCCGGCCT GAAACACGGC
GCCTATCACT TCTTCTATTG GTGCCGGACG GCAGGCGAGC AGGCCGACTG GTTCATCCGC
AACGTGCCAA GGGAAGCCAA CGCTCTTCCG CCCGTCATCG ACGTCGAATG GAACGGCGAA
TCGAGCTGCA AGAGGCGCAT CTCGCCTGCA CGTGTCCGGG AAAAGATGCA GGTCTTCATG
GACAAGCTGG AGCGCTATTA CGGCCAGCGC CCGATCATCT ACACGGCGCC GGACTTCTAC
CGCGACAATT TGAAGGGCCA ACTGCTCGAC TACCCCTTCT GGTTGCGCTC TGTGGCCGCT
CACCCCTCCA AGGTCTATCC GGGTCGCAAG TGGCTGTTCT GGCAATATTC CGGCTCCGGC
CTTTCCGATG GCGTTGACGG CAAGATCGAC CTCAACGTGT TCAACGGCAA TGAAAGCGAT
TGGCACGACT GGGTGGCGTC GCGATAG
 
Protein sequence
MRTSAVPAIL LAALILSGCA ASSGAEDVLG NVPSSETTNA IAQPSGPIPA AAVGDPAPQA 
SPPQQALRWA GEVPEPQALV PADRPVGMPL PTDKPVALLM PANPAGNAMP DVGTRSPTRG
QIYGHRFRDA KPINFGSTSP RKLAVHGVDV SRWQGEIDWE TLRRQGANFV YIKATDGGDH
LDPMFKKNWR RAKEAGLKHG AYHFFYWCRT AGEQADWFIR NVPREANALP PVIDVEWNGE
SSCKRRISPA RVREKMQVFM DKLERYYGQR PIIYTAPDFY RDNLKGQLLD YPFWLRSVAA
HPSKVYPGRK WLFWQYSGSG LSDGVDGKID LNVFNGNESD WHDWVASR