| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_2031 |
|---|
| Symbol | tpiA |
|---|
| ID | 8013063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 2023781 |
|---|
| End bp | 2024551 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644824618 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_002975849 |
|---|
| Protein GI | 241204753 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTG ACGTGCGCCC GCTTGTGGCG GGAAACTGGA AAATGAATGG CATGCGTGCC
TCCCTGGATC AGATCAAGGC GATCGCCGAG GGTGTTCATC CGCCGCTGGC CGACAAGGTC
GAAGCGCTGA TCTGCCCGCC GGCGACGCTG CTCTATGTGG CGACGGCACT GTGCACCGAC
AGCCCGCTGG CGATCGGCGC TCAGGACTGC CATCAGAACC CGTCCGGTGC GCATACCGGC
GACATCTCGG CCGAGATGAT TGCCGATTGT TTCGGCACCT ATGTCATCGT CGGCCATTCC
GAGCGGCGCA CCGACCATGC CGAAACCGAC CATCTGGTCC GCGCCAAGGC GGAGGCCGCC
TTTGCCGCAG GGCTGACGGC GATCATCTGC ATCGGTGAGA CGGCGGATGA ACGCCGGACA
GGCCAGGCGC TCGACGTCAT CAAGCGCCAG CTTTCCGCCT CCGTTCCGGA CGGCGCCACC
GCCGAGACCA CAGTTATCGC CTACGAGCCG ATCTGGGCGA TCGGTACCGG TGTGACGCCG
ACATCAGGTG ATGTCGAGAA GGCGCATGCC TTCATGCGGG CAGAGCTCGC GGCCCGCTTC
GGCGACGAAG GCCGCAAGAT GCGTCTTCTC TATGGCGGAT CGGTCAAGCC GGCCAATGCC
CATGAGCTGA TGGGCATCGC CAATGTCGAC GGCGCGCTGA TCGGCGGAGC GAGCTTGAAA
GCGGCCGACT TCCTCGCCAT CTACCGGGCC TATGAGGCGC TGCTCGCCTG A
|
|---|
| Protein sequence | MTPDVRPLVA GNWKMNGMRA SLDQIKAIAE GVHPPLADKV EALICPPATL LYVATALCTD
SPLAIGAQDC HQNPSGAHTG DISAEMIADC FGTYVIVGHS ERRTDHAETD HLVRAKAEAA
FAAGLTAIIC IGETADERRT GQALDVIKRQ LSASVPDGAT AETTVIAYEP IWAIGTGVTP
TSGDVEKAHA FMRAELAARF GDEGRKMRLL YGGSVKPANA HELMGIANVD GALIGGASLK
AADFLAIYRA YEALLA
|
|---|
| |