Gene Rleg_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1960 
Symbol 
ID8012999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1949460 
End bp1952702 
Gene Length3243 bp 
Protein Length1080 aa 
Translation table11 
GC content63% 
IMG OID644824549 
Productadenylate/guanylate cyclase with TPR repeats 
Protein accessionYP_002975781 
Protein GI241204685 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGCA GCGGCTGCGG GTTCGATATT CAGAGCGGTT TTGCTTTCTG TCCGCGATGC 
GGCGCAAGGC AACCGATCAC CTGCGCCGCC TGCGGCAATG CTTGTCAGCC CGATTTTGCC
TTCTGCCCCA GCTGTGGCGC GTCGATTTCG GGCAAAGTCC AACCCGCATC GAAGCCGAAG
ATCGAGGCGC TACCTCAATC AGAGGGCGAT GCCGACCGGC GGCCGGTGAC CGTGCTCTTT
GCCGATCTCT GCGGCTTCAC GACTCTGAGC GAGCAGATCG ACCCTGAAGT CATGCGGGTA
CTGCAGAACG AATTGTTCGA AGAGATGACC CAGGCGGTCG AGGCTTATGG CGGCTTCGTC
GACAAGTTCG TCGGCGATGC GCTGCTGGCG CTGTTCGGCG CGCCGGTCGC TCATGAGGAC
GATCCGGTCC GGGCGCTCGG GGCCGCACTC GATATGATCG GTCGGGCCAC TGAGGTCGGC
GAGCGCTGGC ACGCCCGCGC CGGCGTGCCG CTCCGCCTGC ATATCGGTAT CAATAGCGGT
CCCGTCGTCA CCGGCGGCTT CGGCGCGGTC AGTACAAAAT CCTATTCGGT GACCGGCGAC
ACGGTGAACA CCGCTCAACG CCTGCAATCC ATGGCCGGCG AAAACGATAT CCTCGTCGGG
CCGCTGACCT ATCGCCTCAC CCGCCATGCC TTTGCCTTCG ACAGTCTTGG CGCGCAGACC
TTGCGGGGTA AAAGCGGCAA CGTCCTTGTC CACCGGCTGA CAGGGCTGTC GGAAGCGCCG
CATACGGCGC GCGGGCTCGA AAGTCTCGGC CTTCAGGCAC CGATGATCGG ACGGGATACG
GAAATGTCGC GGTTGCTGAC ATGCCTCGAC CTTGCCTGCG GCGGTGCGGC GCAGCTTGTC
CGGCTGATCG GCGAAGCCGG CATCGGCAAG TCTCGGCTGG TCAACGAATT CGTCGCAATC
GCCGGCAATG CCGCTCGTTT CCAGGGCCTC GCCATCCGCA AAGCGACCTG CTCTCCGCTC
GGCGAACAAT CCTATGGCAC GCTCGGCGCG GTCGTGCGTA GCGCCTACGG CATCGGCGAG
CGGGACGATC TCGACAGGGC GCGGCAACTG CTGGCAACGG GGTTCCGCGC GCTCGATCTG
ACGCAGGAGG AGGTCGAGGG ACTTTTGCCG CTCTTTCTGC ATGTCCTCGG TCTCGGCGAT
CCCGATGGCG CTTTGCGGTA CATCGAGCCG GAGCAGTTGC GGCGGCAGAT CTTCTATGGC
GTCCGCACCG TCTTCGAGCG GCGGCTGGCG CAAGGTCCCC TGCTGCTTGT CATCGAGGAT
CTGCACTGGG CGGATGCCGC CTCACTGGAA GTGCTTCGCT TCATGATGGA CCGGCTGGAG
CGCAGCCGGT TGATGCTGCT GGCGGTCTAC CGGCCGACAT CGCAGACCGA CCCACTGGAC
TCCAATCGTG TCAGCGTCAC CGTGCAGCGT CTTGCACCAC TGTTTGCGGC CGACGGGCAG
AAGCTGCTTG CTGCGTTTTT CGGCGAGGAT CAAGGCAAGT TGCCGGTCAC GATGCGCAAG
CGTATCCTCG ACCGCGCCGG CGGCAATCCG CTTTTCATCG AAGAAATCCT TCGGGCGCTG
ATCGACATGG GCACGTTGCA CAATGACGGC CAGCGCTGGC ATGTCGCAGC GGAAGACACG
GACGTCGATA TCCCGGTGAA CCTGCAAGCC CTGTTGCTTG CCCGCGTCGA TCGTCTGCCG
CAGGACATCA GACGGCTGGC GCAAGAGGCG GCGGTGGTCG GCCCGAAGTT CGATACCGCC
CTGCTCCGCA CCATCGCCAC CGACCCAGCC GCCATCGATG CCGCATTGGA TCATCTCTGC
GATGCCAATA TCATCGAGGA ATTGCGCGGG CCCGATGCCG GCGGATCGCC GGGATATCGC
TTCAGCCAGA CACTGATGCA CGACGTCATC TACCATAATC TCCTGCTGCA ACGGCGCATG
GAGCTTCATC AACGCATCGG CCGGGCTCTG GAACGTCAAT ATGGCGCAGC GCCCGATCGG
CCCGAGCACC TGGCGCAGCT CGGCCATCAC TTCAGCCTGA CCACCGAAAA GGCCAAAGGG
GCCACCTATC TGATGGCGGC GGGTGATCTG GCGCGCAAGG CCTACGCCAA TGACGATGCA
ATGCGCCTCT ACCGTCAGGC CCTTGCGGCC TTCGCAAACG AGGCGGAGGT GACACCGGAA
CAACTGGCGC TCTTGGAGCG CCTTGCCGAT CTCTGCGGCC CCGCCGGCCT GCGCGACGCC
GCCTTGAACC ATTATCAGCG GGCGCTTGCG ATCCACCGCA CCAAAGACGA CCCTATTGCC
GCAGCGAGGA TATTGCGCAA GGTCGGCCGT TTGCATCTCG ATGCAGGACG CCGCGATCAA
GCGGAGACAT ATTTGGCCGA AGCCGAAGCG ATAATCGCGA CAATCGATGC GCCGGTCGAA
CGTGCACATG TCCTGCAGGA GCGTGGCCAT CTGGCCTTCC GCATGGGGGA TCAGGCCGCT
GCCGCCGAGT GGGCGACGCA GGCACTTCAA TGCCTGCAAA CGCTGCCGAT CGACGGGACG
ACCGAGGCCG GACGGGAGAC AGCGCGAGCG ATGGCGGAGG CGCTGAACAC CAAGGGTGCG
GCCTTTGCGC GGCTAGGACG TCGCCGCGAG GCCGTGCAGG AAGTGGAGCG CAGCCTCTCG
GTCGCCGAAA AAGCCGATCT GCAAAGTGCT GCCTGTCGCG CCTATTCCAA TCTCGGCGTT
CTCTACACGA TTGTTGATCC AGCCAACGCC ATCAAGATCT GCCGGCGCGG ATTGGAGCTT
GCGACCCGTA TCGGCGATCT CGGCTTCCAG GCGCGGCTTC TCGCCAACCT CGCAGTTGCC
TGCTGCACCT TCACCGATCG CTGCGCCGCT GAGGGTGTAC CGGCTGCGGA AAAGGCCGTC
GAAATCGACC GGGCGCTCGA TCAGCGCGAC CATCTCTCCG TGCCGCTGAT CGTGCTGGGC
CAAATTCATC AATGCCACGG GCAGCCAAAG CTAGCTCGTA AGTATTACGA AGAAGCCCTT
GAGGTTGCGA AGGAAATTGA TGAACCGCAA CTGCTCTTTC CGTGCTATGA TGGATTGGCG
ACACTCAGCC TTGAGCATGA CGACATGGAC GAGGCGGAAC GGTATTTCAC GCTGGCACAG
GATGTGTGCA TCCGCCACAA CCTCGATCCA GGCACGCTCG TCGTCCTGCC GTTTCTCGAC
TGA
 
Protein sequence
MECSGCGFDI QSGFAFCPRC GARQPITCAA CGNACQPDFA FCPSCGASIS GKVQPASKPK 
IEALPQSEGD ADRRPVTVLF ADLCGFTTLS EQIDPEVMRV LQNELFEEMT QAVEAYGGFV
DKFVGDALLA LFGAPVAHED DPVRALGAAL DMIGRATEVG ERWHARAGVP LRLHIGINSG
PVVTGGFGAV STKSYSVTGD TVNTAQRLQS MAGENDILVG PLTYRLTRHA FAFDSLGAQT
LRGKSGNVLV HRLTGLSEAP HTARGLESLG LQAPMIGRDT EMSRLLTCLD LACGGAAQLV
RLIGEAGIGK SRLVNEFVAI AGNAARFQGL AIRKATCSPL GEQSYGTLGA VVRSAYGIGE
RDDLDRARQL LATGFRALDL TQEEVEGLLP LFLHVLGLGD PDGALRYIEP EQLRRQIFYG
VRTVFERRLA QGPLLLVIED LHWADAASLE VLRFMMDRLE RSRLMLLAVY RPTSQTDPLD
SNRVSVTVQR LAPLFAADGQ KLLAAFFGED QGKLPVTMRK RILDRAGGNP LFIEEILRAL
IDMGTLHNDG QRWHVAAEDT DVDIPVNLQA LLLARVDRLP QDIRRLAQEA AVVGPKFDTA
LLRTIATDPA AIDAALDHLC DANIIEELRG PDAGGSPGYR FSQTLMHDVI YHNLLLQRRM
ELHQRIGRAL ERQYGAAPDR PEHLAQLGHH FSLTTEKAKG ATYLMAAGDL ARKAYANDDA
MRLYRQALAA FANEAEVTPE QLALLERLAD LCGPAGLRDA ALNHYQRALA IHRTKDDPIA
AARILRKVGR LHLDAGRRDQ AETYLAEAEA IIATIDAPVE RAHVLQERGH LAFRMGDQAA
AAEWATQALQ CLQTLPIDGT TEAGRETARA MAEALNTKGA AFARLGRRRE AVQEVERSLS
VAEKADLQSA ACRAYSNLGV LYTIVDPANA IKICRRGLEL ATRIGDLGFQ ARLLANLAVA
CCTFTDRCAA EGVPAAEKAV EIDRALDQRD HLSVPLIVLG QIHQCHGQPK LARKYYEEAL
EVAKEIDEPQ LLFPCYDGLA TLSLEHDDMD EAERYFTLAQ DVCIRHNLDP GTLVVLPFLD